RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 STAMBPO95630 424 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 ZSCAN5DPP0CG00 497 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 ESRRAP11474 423 aaPredicted RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 TNFAIP2Q03169 654 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SPDYAQ5MJ70 313 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 UTP4Q969X6 686 aaKnown RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 ACAP3Q96P50 834 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SYT15Q9BQS2 421 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SMARCAD1Q9H4L7 1026 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 HAO1Q9UJM8 370 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CCDC195A0A1B0GUA6 201 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CFAP69A5D8W1 941 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 LPXNO60711 386 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 PTPRAP18433 802 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 TARSP26639 723 aaKnown RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 POLE2P56282 527 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 TAP1Q03518 808 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 GEN1Q17RS7 908 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 MFSD7Q6UXD7 560 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 CPNE8Q86YQ8 564 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 PDCD7Q8N8D1 485 aaKnown RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 CGRRF1Q99675 332 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 GORASP1Q9BQQ3 440 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 SAE1Q9UBE0 346 aaPredicted RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 XPO7Q9UIA9 1087 aaKnown RBP10.94□□□□□ -0.66
RNF40-204ENST00000563683 ADGRA3Q8IWK6 1321 aa10.94□□□□□ -0.66
RNF40-204ENST00000563683 MYH14Q7Z406 1995 aaKnown RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 F8VP50 259 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 CREB3O43889 395 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 LCP1P13796 627 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 TAC1P20366 129 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 HSD17B4P51659 736 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 KLHL38Q2WGJ6 581 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 TTC27Q6P3X3 843 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 ARHGAP18Q8N392 663 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 DEPDC1BQ8WUY9 529 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 TUBB6Q9BUF5 446 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 TBC1D10AQ9BXI6 508 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 DCLK3Q9C098 648 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 G3BP2Q9UN86 482 aaKnown RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 PTGER2P43116 358 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 RNASELQ05823 741 aaKnown RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 MGAT5Q09328 741 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 LRRC23Q53EV4 343 aaPredicted RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 ARHGAP22Q7Z5H3 698 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 SIX6OS1Q8N1H7 587 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 BSNDQ8WZ55 320 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 FAM192AQ9GZU8 254 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 NPHS2Q9NP85 383 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 LGALS13Q9UHV8 139 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 ZFP69BQ9UJL9 534 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 ZMYND8Q9ULU4 1186 aaPredicted RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 NAALADL1Q9UQQ1 740 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 PSTPIP1O43586 416 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 PIAS1O75925 651 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 CREB1P16220 341 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 SH3BGRP55822 239 aaPredicted RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 OTUD4Q01804 1114 aaKnown RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 CCNG2Q16589 344 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 RIBC1Q8N443 379 aaPredicted RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 OR5B17Q8NGF7 314 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 ACTL9Q8TC94 416 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 GBP5Q96PP8 586 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 PDGFDQ9GZP0 370 aaPredicted RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 IFT122Q9HBG6 1241 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 PPARGC1AQ9UBK2 798 aaKnown RBP10.93□□□□□ -0.66
RNF40-204ENST00000563683 DNPEPQ9ULA0 475 aa10.93□□□□□ -0.66
RNF40-204ENST00000563683 KLRG2A4D1S0 409 aaPredicted RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 XPOTO43592 962 aaKnown RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 CXCL8P10145 99 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 KRT4P19013 534 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 PTPN4P29074 926 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TMEM132DQ14C87 1099 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 AMHR2Q16671 573 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 HPDLQ96IR7 371 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.92□□□□□ -0.66
RNF40-204ENST00000563683 DMAC2Q9NW81 257 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 PDP2Q9P2J9 529 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 PHTF1Q9UMS5 762 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 MAGEA13PA6NCF6 341 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TBC1D12O60347 775 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 GH1P01241 217 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 RPL7AP62424 266 aaKnown RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 LAMTOR4Q0VGL1 99 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TMEM132BQ14DG7 1078 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 PSMD6Q15008 389 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TFDP3Q5H9I0 405 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 GLRA4Q5JXX5 417 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 TDRD10Q5VZ19 366 aaKnown RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 NXNQ6DKJ4 435 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 RFX8Q6ZV50 586 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 RAPH1Q70E73 1250 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 CCDC125Q86Z20 511 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 C12orf50Q8NA57 414 aaPredicted RBP10.92□□□□□ -0.66
RNF40-204ENST00000563683 EXD1Q8NHP7 514 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 SCYL1Q96KG9 808 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 VCX3BQ9H321 246 aa10.92□□□□□ -0.66
RNF40-204ENST00000563683 VCX3AQ9NNX9 186 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms