RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 KXD1Q9BQD3 176 aa21.58■■□□□ 1.05
CMTM3-206ENST00000563672 PLA2G2FQ9BZM2 168 aa21.58■■□□□ 1.05
CMTM3-206ENST00000563672 TMEM30AQ9NV96 361 aa21.58■■□□□ 1.05
CMTM3-206ENST00000563672 F8VP50 259 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 TRIM66O15016 1216 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 CCDC192P0DO97 292 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 ERCC5P28715 1186 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-206ENST00000563672 ORC1Q13415 861 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 IRF2BP1Q8IU81 584 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 FUKQ8N0W3 1084 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 NT5C1AQ9BXI3 368 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 FAM124BQ9H5Z6 455 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-206ENST00000563672 ZFP14Q9HCL3 533 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 SLC2A4RGQ9NR83 387 aa21.57■■□□□ 1.04
CMTM3-206ENST00000563672 MAGED2Q9UNF1 606 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-206ENST00000563672 MBD3O95983 291 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 CD58P19256 250 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 WEE1P30291 646 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 CYP4F8P98187 520 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 KCNH2Q12809 1159 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 ARHGAP15Q53QZ3 475 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 CT47A1Q5JQC4 288 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-206ENST00000563672 GPR158Q5T848 1215 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 FAM35AQ86V20 835 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 TTC39CQ8N584 583 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 C12orf29Q8N999 325 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 LMO3Q8TAP4 145 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 GCNAQ96QF7 691 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 ARID3AQ99856 593 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 SLITRK6Q9H5Y7 841 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 TASP1Q9H6P5 420 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 CISHQ9NSE2 258 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 UXTQ9UBK9 157 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-206ENST00000563672 WNT16Q9UBV4 365 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 DACH1Q9UI36 760 aa21.56■■□□□ 1.04
CMTM3-206ENST00000563672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.56■■□□□ 1.04
CMTM3-206ENST00000563672 SOBPA7XYQ1 873 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 TADA3O75528 432 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 ANXA13P27216 316 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 VIPR2P41587 438 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 GPC5P78333 572 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 CUL2Q13617 745 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 DENND5BQ6ZUT9 1274 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 PBXIP1Q96AQ6 731 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 CNOT6LQ96LI5 555 aaKnown RBP21.55■■□□□ 1.04
CMTM3-206ENST00000563672 TTLL2Q9BWV7 592 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 SLC46A2Q9BY10 475 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 ZMYM5Q9UJ78 669 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 ATP8B3O60423 1300 aa21.55■■□□□ 1.04
CMTM3-206ENST00000563672 AFPP02771 609 aaKnown RBP21.54■■□□□ 1.04
CMTM3-206ENST00000563672 CFHP08603 1231 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 CCDC130P13994 396 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 USP46P62068 366 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 ARID3BQ8IVW6 561 aaPredicted RBP21.54■■□□□ 1.04
CMTM3-206ENST00000563672 SLC2A14Q8TDB8 520 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 E2F7Q96AV8 911 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 SMARCD1Q96GM5 515 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 KCNK16Q96T55 309 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 HNRNPABQ99729 332 aaKnown RBP21.54■■□□□ 1.04
CMTM3-206ENST00000563672 MED10Q9BTT4 135 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 FAM49BQ9NUQ9 324 aa21.54■■□□□ 1.04
CMTM3-206ENST00000563672 PTPRDP23468 1912 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 PDGFBP01127 241 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-206ENST00000563672 TRIM21P19474 475 aaKnown RBP21.53■■□□□ 1.04
CMTM3-206ENST00000563672 DDX6P26196 483 aaKnown RBP eCLIP21.53■■□□□ 1.04
CMTM3-206ENST00000563672 CETN1Q12798 172 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 LRMPQ12912 555 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 VITQ6UXI7 678 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 MON1AQ86VX9 555 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 EHBP1Q8NDI1 1231 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 MRPS31Q92665 395 aaKnown RBP21.53■■□□□ 1.04
CMTM3-206ENST00000563672 RSPRY1Q96DX4 576 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 THAP9Q9H5L6 903 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 CSNK1G1Q9HCP0 422 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 DMAP1Q9NPF5 467 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-206ENST00000563672 EHD2Q9NZN4 543 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 FBXL21Q9UKT6 434 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 NCANO14594 1321 aa21.53■■□□□ 1.04
CMTM3-206ENST00000563672 ZDBF2Q9HCK1 2354 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 AP1G2O75843 785 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 RAD23BP54727 409 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 TXNDC8Q6A555 127 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 MFSD6LQ8IWD5 586 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 FBXL6Q8N531 539 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 UBR7Q8N806 425 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 SLC4A11Q8NBS3 891 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 ZMIZ2Q8NF64 920 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 CYFIP2Q96F07 1278 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 SMOQ99835 787 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 DNAI2Q9GZS0 605 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 KRT82Q9NSB4 513 aa21.52■■□□□ 1.04
CMTM3-206ENST00000563672 KRBA1A5PL33 1030 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 HEPACAM2A8MVW5 462 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 TNFRSF10BO14763 440 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 BEST1O76090 585 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 PSMC3P17980 439 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 TBXAS1P24557 533 aaPredicted RBP21.51■■□□□ 1.03
CMTM3-206ENST00000563672 TPD52L1Q16890 204 aaPredicted RBP21.51■■□□□ 1.03
CMTM3-206ENST00000563672 ZNF394Q53GI3 561 aa21.51■■□□□ 1.03
CMTM3-206ENST00000563672 GPIHBP1Q8IV16 184 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms