RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 CPSF3Q9UKF6 684 aaKnown RBP8.13□□□□□ -1.11
CYLD-205ENST00000563629 TPX2Q9ULW0 747 aaKnown RBP8.13□□□□□ -1.11
CYLD-205ENST00000563629 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.13□□□□□ -1.11
CYLD-205ENST00000563629 USP15Q9Y4E8 981 aaPredicted RBP8.13□□□□□ -1.11
CYLD-205ENST00000563629 TCRBV7S3A2A0A539 114 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 A8MUI8 341 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ZBTB42B2RXF5 422 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 LRCH4O75427 683 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 VTNP04004 478 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ZNF286BP0CG31 522 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 GCAP28676 217 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 FOXN2P32314 431 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CDKN2BP42772 138 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CTCFP49711 727 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 PLCB4Q15147 1175 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 FAM110CQ1W6H9 321 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 DEFB115Q30KQ5 88 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ZNF667Q5HYK9 610 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 JADE1Q6IE81 842 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 MPZL3Q6UWV2 235 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ZPBP2Q6X784 338 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 SPATA21Q7Z572 469 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 PLEKHH3Q7Z736 793 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 UBR7Q8N806 425 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CCDC63Q8NA47 563 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 BBOF1Q8ND07 529 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 PIWIL1Q96J94 861 aaKnown RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CAPNS2Q96L46 248 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 RNPEPQ9H4A4 650 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ALG13Q9NP73 1137 aaKnown RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 SLCO1B3Q9NPD5 702 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 KCNG1Q9UIX4 513 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 GABRQQ9UN88 632 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 MANSC4A6NHS7 340 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 CA4P22748 312 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 EDNRBP24530 442 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ABCD1P33897 745 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 RDXP35241 583 aaKnown RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 RPA3P35244 121 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 RGS7P49802 495 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 EFNA5P52803 228 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 VCPP55072 806 aaKnown RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 ATP11AP98196 1134 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 TMEM62Q0P6H9 643 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 TFDP1Q14186 410 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ITIH4Q14624 930 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ZNF792Q3KQV3 632 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 BBS9Q3SYG4 887 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 FAM102AQ5T9C2 384 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 IER5Q5VY09 327 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CGB2Q6NT52 195 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ARHGEF18Q6ZSZ5 1173 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 SUGP1Q8IWZ8 645 aaKnown RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 ARFGAP1Q8N6T3 406 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 FAM71DQ8N9W8 422 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 KCTD6Q8NC69 237 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 RSAD2Q8WXG1 361 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 PRCCQ92733 491 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 MAML3Q96JK9 1138 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CFAP57Q96MR6 1250 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CDT1Q9H211 546 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 TRABDQ9H4I3 376 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 ECT2Q9H8V3 914 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 RPF1Q9H9Y2 349 aaKnown RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 GPATCH2LQ9NWQ4 482 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
CYLD-205ENST00000563629 CNTN6Q9UQ52 1028 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 AKT3Q9Y243 479 aa8.12□□□□□ -1.11
CYLD-205ENST00000563629 CDH23Q9H251 3354 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 A0A087WZ62 844 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 TCRBV5S1A1TA0A578 114 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 F5H423 210 aaPredicted RBP8.11□□□□□ -1.11
CYLD-205ENST00000563629 GPR25O00155 361 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 ABLIM1O14639 778 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 TNPO2O14787 897 aaKnown RBP8.11□□□□□ -1.11
CYLD-205ENST00000563629 SUN1O94901 812 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 WDR4P57081 412 aaKnown RBP8.11□□□□□ -1.11
CYLD-205ENST00000563629 PIGHQ14442 188 aaPredicted RBP8.11□□□□□ -1.11
CYLD-205ENST00000563629 STAT4Q14765 748 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 HIF1AQ16665 826 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 C15orf59Q2T9L4 293 aaPredicted RBP8.11□□□□□ -1.11
CYLD-205ENST00000563629 FNBP1LQ5T0N5 605 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 FAXCQ5TGI0 409 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 SCYL2Q6P3W7 929 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 C1orf228Q6PIY5 440 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 C17orf99Q6UX52 265 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
CYLD-205ENST00000563629 FAM228AQ86W67 206 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 UNC45BQ8IWX7 931 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 C1orf127Q8N9H9 656 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 CKAP2Q8WWK9 683 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 SGSM3Q96HU1 749 aa8.11□□□□□ -1.11
CYLD-205ENST00000563629 HEXIM2Q96MH2 286 aaKnown RBP8.11□□□□□ -1.11
CYLD-205ENST00000563629 FDXACB1Q9BRP7 624 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms