RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 COPS2P61201 443 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 SKOR1P84550 965 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 SREBF2Q12772 1141 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 ODF2Q5BJF6 829 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 XKR4Q5GH76 650 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 ZNF618Q5T7W0 954 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 OR6B2Q6IFH4 312 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 PMF1Q6P1K2 205 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 OR6B3Q8NGW1 331 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 KBTBD7Q8WVZ9 684 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 PRDM4Q9UKN5 801 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 GRAP2O75791 330 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 NUDT17P0C025 328 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 GNAT1P11488 350 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 ATF2P15336 505 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 NR1D1P20393 614 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 MIPP30301 263 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 SLC29A2Q14542 456 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 KRT71Q3SY84 523 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 FBXO47Q5MNV8 452 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 NME8Q8N427 588 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 UHMK1Q8TAS1 419 aaKnown RBP20.11■□□□□ 0.81
SMPD3-203ENST00000563226 CAPS2Q9BXY5 557 aa20.11■□□□□ 0.81
SMPD3-203ENST00000563226 BCCIPQ9P287 314 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMPD3-203ENST00000563226 FEZ2Q9UHY8 353 aaPredicted RBP20.11■□□□□ 0.81
SMPD3-203ENST00000563226 GABBR2O75899 941 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 KCNE1P15382 129 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 ITIH2P19823 946 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 KLRC2P26717 231 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 ADCY8P40145 1251 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 GJA9P57773 515 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 IFFO1Q0D2I5 559 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 SKIDA1Q1XH10 827 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 NBPF20Q3BBV1 942 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 DENND2CQ68D51 928 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 LRRC31Q6UY01 552 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 KDM7AQ6ZMT4 941 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 PWWP2AQ96N64 755 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 PEBP4Q96S96 227 aa20.1■□□□□ 0.81
SMPD3-203ENST00000563226 DNAJC17Q9NVM6 304 aaKnown RBP20.1■□□□□ 0.81
SMPD3-203ENST00000563226 A8MXQ7 604 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 DCDC2CA8MYV0 355 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 CA12O43570 354 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 PDGFRBP09619 1106 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 RARGP13631 454 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 LMO2P25791 158 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 CAP1Q01518 475 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 BYSLQ13895 437 aaKnown RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 C15orf59Q2T9L4 293 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 GDF6Q6KF10 455 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 ZNF365Q70YC5 407 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 MTG1Q9BT17 334 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 FAM129AQ9BZQ8 928 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 SAE1Q9UBE0 346 aaPredicted RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 ABT1Q9ULW3 272 aaKnown RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 CDY2AQ9Y6F7 541 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 GRIN2DO15399 1336 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 C2CD4BA6NLJ0 364 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 MEIS3P2A8K0S8 358 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 KPNA7A9QM74 516 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 RIPK2O43353 540 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 KRT7P08729 469 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 ZSCAN5DPP0CG00 497 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 KDELR1P24390 212 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 IRAK1P51617 712 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 DYNLT1P63172 113 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 GNGT1P63211 74 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 MRPS6P82932 125 aaKnown RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 PPARDQ03181 441 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 STILQ15468 1287 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 HADHQ16836 314 aaKnown RBP20.09■□□□□ 0.81
SMPD3-203ENST00000563226 GSTA5Q7RTV2 222 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 RXFP2Q8WXD0 754 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 ZFP42Q96MM3 310 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 GTF2IRD1Q9UHL9 959 aa20.09■□□□□ 0.81
SMPD3-203ENST00000563226 TRUB2O95900 331 aaKnown RBP20.08■□□□□ 0.81
SMPD3-203ENST00000563226 CD4P01730 458 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 CTSHP09668 335 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 CCDC130P13994 396 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 ETS1P14921 441 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 GPD1P21695 349 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 HPDP32754 393 aaPredicted RBP20.08■□□□□ 0.81
SMPD3-203ENST00000563226 TM4SF4P48230 202 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 FLT3LGP49771 235 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 ZNF143P52747 638 aaPredicted RBP20.08■□□□□ 0.81
SMPD3-203ENST00000563226 PDE4CQ08493 712 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 SLMAPQ14BN4 828 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 TAF2Q6P1X5 1199 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 UNC93AQ86WB7 457 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 HSPH1Q92598 858 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 DDX23Q9BUQ8 820 aaKnown RBP20.08■□□□□ 0.81
SMPD3-203ENST00000563226 CDC42EP4Q9H3Q1 356 aaKnown RBP20.08■□□□□ 0.81
SMPD3-203ENST00000563226 USP18Q9UMW8 372 aa20.08■□□□□ 0.81
SMPD3-203ENST00000563226 BRCA2P51587 3418 aa20.08■□□□□ 0.8
SMPD3-203ENST00000563226 PTGESO14684 152 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 CAND2O75155 1236 aa20.07■□□□□ 0.8
SMPD3-203ENST00000563226 IGFBP6P24592 240 aaPredicted RBP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 EIF3BP55884 814 aaKnown RBP20.07■□□□□ 0.8
SMPD3-203ENST00000563226 FCGRTP55899 365 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms