RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 HAO1Q9UJM8 370 aa13.72□□□□□ -0.21
USB1-207ENST00000563149 LIN7AO14910 233 aaPredicted RBP13.71□□□□□ -0.21
USB1-207ENST00000563149 TGDSO95455 350 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 IL1BP01584 269 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 PRKCBP05771 671 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 CALB2P22676 271 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 TARSP26639 723 aaKnown RBP13.71□□□□□ -0.21
USB1-207ENST00000563149 SSTR1P30872 391 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 ASPAP45381 313 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 MAPK6Q16659 721 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 PTPN20Q4JDL3 420 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 CYP4A22Q5TCH4 519 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 DENND1BQ6P3S1 775 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 CAPN12Q6ZSI9 719 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 ZBTB33Q86T24 672 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 CHSY1Q86X52 802 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 PRPF31Q8WWY3 499 aaKnown RBP13.71□□□□□ -0.21
USB1-207ENST00000563149 SEPT1Q8WYJ6 367 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 CYTH2Q99418 400 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 FRMD8Q9BZ67 464 aaPredicted RBP13.71□□□□□ -0.21
USB1-207ENST00000563149 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 RNPEPL1Q9HAU8 725 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 ZFP69BQ9UJL9 534 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 LCTP09848 1927 aa13.71□□□□□ -0.21
USB1-207ENST00000563149 ABLIM1O14639 778 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 MCF2LO15068 1137 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 FAM155BO75949 473 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 RNF8O76064 485 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 FARP2O94887 1054 aaPredicted RBP13.71□□□□□ -0.22
USB1-207ENST00000563149 LUC7L3O95232 432 aaKnown RBP13.71□□□□□ -0.22
USB1-207ENST00000563149 HOXC6P09630 235 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 TGFB3P10600 412 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 GNAZP19086 355 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 GABRB2P47870 512 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 PSMC1P62191 440 aaKnown RBP13.71□□□□□ -0.22
USB1-207ENST00000563149 DPYSL3Q14195 570 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 NAA25Q14CX7 972 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 ANKRD22Q5VYY1 191 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 ZNF276Q8N554 614 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 ARFGAP1Q8N6T3 406 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 ENDOVQ8N8Q3 282 aaKnown RBP13.71□□□□□ -0.22
USB1-207ENST00000563149 ACSF2Q96CM8 615 aaPredicted RBP13.71□□□□□ -0.22
USB1-207ENST00000563149 WRNIP1Q96S55 665 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 TBC1D10AQ9BXI6 508 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 BCO2Q9BYV7 579 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 ZWILCHQ9H900 591 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 RSAD1Q9HA92 442 aa13.71□□□□□ -0.22
USB1-207ENST00000563149 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
USB1-207ENST00000563149 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 GOLGA8MH3BSY2 632 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 HGSO14964 777 aaPredicted RBP13.7□□□□□ -0.22
USB1-207ENST00000563149 IL18RAPO95256 599 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 EGFRP00533 1210 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
USB1-207ENST00000563149 PROZP22891 400 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 IL1R2P27930 398 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 PCK1P35558 622 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 GDF10P55107 478 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 EIF3EP60228 445 aaKnown RBP13.7□□□□□ -0.22
USB1-207ENST00000563149 SLC18A2Q05940 514 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 MSS51Q4VC12 460 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 ANKRD20A2Q5SQ80 823 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 ANKRD20A1Q5TYW2 823 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 ANKRD20A3Q5VUR7 823 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 SCARA3Q6AZY7 606 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 MPZL3Q6UWV2 235 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 LONP2Q86WA8 852 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 XYLT1Q86Y38 959 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 RFX6Q8HWS3 928 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 KCTD6Q8NC69 237 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 FAM13CQ8NE31 585 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 JOSD2Q8TAC2 188 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 TCP10LQ8TDR4 215 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 STK32AQ8WU08 396 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 MCRS1Q96EZ8 462 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 ZNF570Q96NI8 536 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 TRIM55Q9BYV6 548 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 PNPLA8Q9NP80 782 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 ASNSD1Q9NWL6 643 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
USB1-207ENST00000563149 SUFUQ9UMX1 484 aa13.7□□□□□ -0.22
USB1-207ENST00000563149 IGKV6-21A0A0C4DH24 114 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 DNAJC6O75061 913 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 PEX11AO75192 247 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 ENDOD1O94919 500 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
USB1-207ENST00000563149 MT-ND3P03897 115 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 DHRS4L1P0CG22 281 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 EDNRBP24530 442 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 ADRA1DP25100 572 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 DYNLT1P63172 113 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
USB1-207ENST00000563149 LAMTOR4Q0VGL1 99 aa13.69□□□□□ -0.22
USB1-207ENST00000563149 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms