RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 MAGEC2Q9UBF1 373 aaPredicted RBP11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 HMGXB4Q9UGU5 601 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 FRMD4BQ9Y2L6 1034 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 MYO16Q9Y6X6 1858 aa11.84□□□□□ -0.51
LPCAT4-202ENST00000562404 TRIM49BA6NDI0 452 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 GOLGA6L4A6NEF3 574 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM170BA6NMN3 283 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 A8MXQ7 604 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 F8VP50 259 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF263O14978 683 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 FGF19O95750 216 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 ASS1P00966 412 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 BMP6P22004 513 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 RFX1P22670 979 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 WEE1P30291 646 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 MAGEA11P43364 429 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 ASPAP45381 313 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 AP3M2P53677 418 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 MCCD1P59942 119 aaPredicted RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 RPL10AP62906 217 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TNK2Q07912 1038 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TAF12Q16514 161 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF667Q5HYK9 610 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF658Q5TYW1 1059 aaPredicted RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 ANKRD40Q6AI12 368 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TXNDC11Q6PKC3 985 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 C4orf50Q6ZRC1 276 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 B3GALNT2Q8NCR0 500 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TAS1R2Q8TE23 839 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 IRF7Q92985 503 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 USP13Q92995 863 aaPredicted RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TRMT2BQ96GJ1 504 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 SHDQ96IW2 340 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TWNKQ96RR1 684 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 CYP2S1Q96SQ9 504 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 TRPV5Q9NQA5 729 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
LPCAT4-202ENST00000562404 C2orf78A6NCI8 922 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 OTOL1A6NHN0 477 aaPredicted RBP11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 IKBKBO14920 756 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 CHADO15335 359 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 KIF20AO95235 890 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM163BP0C2L3 166 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 PSMC2P35998 433 aaKnown RBP11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 GRIK1P39086 918 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 ZXDBP98169 803 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 SGSM1Q2NKQ1 1148 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 EDRF1Q3B7T1 1238 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 ARHGAP15Q53QZ3 475 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 VSTM1Q6UX27 236 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 ACOT1Q86TX2 421 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 MON1AQ86VX9 555 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 ZC3H3Q8IXZ2 948 aaKnown RBP11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 SEMA4DQ92854 862 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 CHFRQ96EP1 664 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 SPATA17Q96L03 361 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 TIGD1Q96MW7 591 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 GSDMAQ96QA5 445 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 KCNK16Q96T55 309 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 GCNT4Q9P109 453 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 MAN1B1Q9UKM7 699 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 NDRG2Q9UN36 371 aaKnown RBP11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 PIAS3Q9Y6X2 628 aa11.82□□□□□ -0.52
LPCAT4-202ENST00000562404 ZFHX2Q9C0A1 2572 aaPredicted RBP11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 BEST1O76090 585 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 CCDC130P13994 396 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 CCNE1P24864 410 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 PIK3CAP42336 1068 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 NDST1P52848 882 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 TRIM68Q6AZZ1 485 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF852Q6ZMS4 543 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 DENND5BQ6ZUT9 1274 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 INTS8Q75QN2 995 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM35AQ86V20 835 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 FUKQ8N0W3 1084 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 ARL14EPQ8N8R7 260 aaPredicted RBP11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 C12orf29Q8N999 325 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 ZMIZ2Q8NF64 920 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 BPIFB1Q8TDL5 484 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 WHAMMQ8TF30 809 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 MRPS31Q92665 395 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 SMARCE1Q969G3 411 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 E2F7Q96AV8 911 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 CLDN23Q96B33 292 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 GCNAQ96QF7 691 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 TTLL2Q9BWV7 592 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 BCO2Q9BYV7 579 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 OSBPL6Q9BZF3 934 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 OBP2AQ9NY56 170 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 KIAA1549LQ6ZVL6 1849 aa11.81□□□□□ -0.52
LPCAT4-202ENST00000562404 DPYSL4O14531 572 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 CLSTN1O94985 981 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms