RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ARHGEF19Q8IW93 802 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 FUKQ8N0W3 1084 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 C12orf29Q8N999 325 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 GPR152Q8TDT2 470 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 ING5Q8WYH8 240 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 TRMT2BQ96GJ1 504 aaKnown RBP17.76■□□□□ 0.43
CLK3-207ENST00000562389 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 MED10Q9BTT4 135 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 FAM49BQ9NUQ9 324 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 GDE1Q9NZC3 331 aa17.76■□□□□ 0.43
CLK3-207ENST00000562389 ZNF638Q14966 1978 aaKnown RBP17.75■□□□□ 0.43
CLK3-207ENST00000562389 NCOR1O75376 2440 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 SLC38A8A6NNN8 435 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 F8VP50 259 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 NRG2O14511 850 aaPredicted RBP17.75■□□□□ 0.43
CLK3-207ENST00000562389 ZNF18P17022 549 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 CDC25CP30307 473 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 CACNA2D1P54289 1103 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 NFKBIBQ15653 356 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 PHLDB3Q6NSJ2 640 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 GAREM2Q75VX8 874 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 AOPEPQ8N6M6 819 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 STKLD1Q8NE28 680 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 SHKBP1Q8TBC3 707 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 SLC2A14Q8TDB8 520 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 KAT5Q92993 513 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 FAM81BQ96LP2 452 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 MYRFLQ96LU7 910 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 HNRNPABQ99729 332 aaKnown RBP17.75■□□□□ 0.43
CLK3-207ENST00000562389 CRACR2AQ9BSW2 395 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 IL21Q9HBE4 155 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 KRT82Q9NSB4 513 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 TMEM30AQ9NV96 361 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 UXTQ9UBK9 157 aaPredicted RBP17.75■□□□□ 0.43
CLK3-207ENST00000562389 LIMD1Q9UGP4 676 aa17.75■□□□□ 0.43
CLK3-207ENST00000562389 NUP210Q8TEM1 1887 aaPredicted RBP17.74■□□□□ 0.43
CLK3-207ENST00000562389 A0A1W2PRU2 124 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 DLL1O00548 723 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 SLC9A1P19634 815 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 ACO1P21399 889 aaKnown RBP17.74■□□□□ 0.43
CLK3-207ENST00000562389 PON1P27169 355 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 GABRR2P28476 465 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 MTMR3Q13615 1198 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 KRT31Q15323 416 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 RRAGAQ7L523 313 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 ENOSF1Q7L5Y1 443 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 DHX40Q8IX18 779 aaKnown RBP17.74■□□□□ 0.43
CLK3-207ENST00000562389 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 CYFIP2Q96F07 1278 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 HEXIM2Q96MH2 286 aaKnown RBP17.74■□□□□ 0.43
CLK3-207ENST00000562389 KREMEN1Q96MU8 473 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 HSD3B7Q9H2F3 369 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 CSNK1G1Q9HCP0 422 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
CLK3-207ENST00000562389 TAB2Q9NYJ8 693 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 IGSF9Q9P2J2 1179 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 MYO10Q9HD67 2058 aa17.74■□□□□ 0.43
CLK3-207ENST00000562389 SMTNL1A8MU46 457 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 ANHXE9PGG2 379 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 AP1G2O75843 785 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 TPM2P07951 284 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 FAM200BP0CF97 657 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 GJA1P17302 382 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 ADORA2BP29275 332 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 ZNF165P49910 485 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 TEAD2Q15562 447 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 PPP1R26Q5T8A7 1209 aaPredicted RBP17.73■□□□□ 0.43
CLK3-207ENST00000562389 ARHGAP17Q68EM7 881 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 POTEHQ6S545 545 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 DENND5BQ6ZUT9 1274 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 ANKRD20A12PQ8NF67 263 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 NXPE3Q969Y0 559 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 MCRS1Q96EZ8 462 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 GCNAQ96QF7 691 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 SMOQ99835 787 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 TTLL2Q9BWV7 592 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 GPR88Q9GZN0 384 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 ATXN3LQ9H3M9 355 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 EHD2Q9NZN4 543 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 APEX2Q9UBZ4 518 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 LIMA1Q9UHB6 759 aaKnown RBP17.73■□□□□ 0.43
CLK3-207ENST00000562389 MUTYHQ9UIF7 546 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 MAGED2Q9UNF1 606 aaPredicted RBP17.73■□□□□ 0.43
CLK3-207ENST00000562389 PCDHB4Q9Y5E5 795 aa17.73■□□□□ 0.43
CLK3-207ENST00000562389 ANAPC1Q9H1A4 1944 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 PES1O00541 588 aaKnown RBP17.72■□□□□ 0.43
CLK3-207ENST00000562389 F11P03951 625 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 PAEPP09466 180 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 HTR4Q13639 388 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 PTPN21Q16825 1174 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 ARHGAP15Q53QZ3 475 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 SMYD5Q6GMV2 418 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 TMEM270Q6UE05 265 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 MTSS1LQ765P7 747 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 TMEM150AQ86TG1 271 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 ZMIZ2Q8NF64 920 aa17.72■□□□□ 0.43
CLK3-207ENST00000562389 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLK3-207ENST00000562389 KCNK16Q96T55 309 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms