RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 DUPD1Q68J44 220 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 TRNP1Q6NT89 227 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 CCDC137Q6PK04 289 aaKnown RBP17.44■□□□□ 0.38
PKD1-225ENST00000562297 JAMLQ86YT9 394 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 STK32AQ8WU08 396 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.44■□□□□ 0.38
PKD1-225ENST00000562297 SNX25Q9H3E2 840 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 SAGE1Q9NXZ1 904 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 PTCH2Q9Y6C5 1203 aa17.44■□□□□ 0.38
PKD1-225ENST00000562297 FAM187AA6NFU0 413 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 PIK3R2O00459 728 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 CYB561D2O14569 222 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 DAPK3O43293 454 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 FAM163BP0C2L3 166 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 GJC1P36383 396 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 SSR1P43307 286 aaKnown RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 RPL34P49207 117 aaKnown RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 FNTAP49354 379 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 RGS7P49802 495 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 SMC1AQ14683 1233 aaKnown RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 FAM102AQ5T9C2 384 aaPredicted RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 POLNQ7Z5Q5 900 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 ANKRD52Q8NB46 1076 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 PAAF1Q9BRP4 392 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 ERP44Q9BS26 406 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 OSBPL8Q9BZF1 889 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 MIS12Q9H081 205 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 NEUROG2Q9H2A3 272 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 KLHL11Q9NVR0 708 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 HESX1Q9UBX0 185 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 A0A0U1RQG5 324 aaPredicted RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 C2CD4BA6NLJ0 364 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 IL1R2P27930 398 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 UPP1Q16831 310 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 WSCD1Q658N2 575 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 OLFML1Q6UWY5 402 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 ZNF598Q86UK7 904 aaKnown RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 CCDC50Q8IVM0 306 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 RCOR2Q8IZ40 523 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 KHSRPQ92945 711 aaKnown RBP eCLIP17.43■□□□□ 0.38
PKD1-225ENST00000562297 SLITRK1Q96PX8 696 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 RSAD1Q9HA92 442 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 PHF24Q9UPV7 400 aa17.43■□□□□ 0.38
PKD1-225ENST00000562297 UTP11Q9Y3A2 253 aaKnown RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.43■□□□□ 0.38
PKD1-225ENST00000562297 PODXLO00592 558 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 AARSP49588 968 aaKnown RBP eCLIP17.42■□□□□ 0.38
PKD1-225ENST00000562297 ZNF143P52747 638 aaPredicted RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 CCDC142Q17RM4 750 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 MAIP1Q8WWC4 291 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 C1orf54Q8WWF1 131 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 RAPGEF5Q92565 580 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 SLCO2A1Q92959 643 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 SENP8Q96LD8 212 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 HEMGNQ9BXL5 484 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 RAB17Q9H0T7 212 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 R3HDM2Q9Y2K5 976 aaKnown RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 PI4K2BG5E9Z4 385 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 H3BQF6 201 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 PAPSS1O43252 624 aaPredicted RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 ATP2C2O75185 946 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 TKTP29401 623 aaKnown RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 RPL9P32969 192 aaKnown RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 PTPN7P35236 360 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 FLT3P36888 993 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 KCNJ1P48048 391 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 BCAT1P54687 386 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 ADCY2Q08462 1091 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 BST2Q10589 180 aaKnown RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 ACAP1Q15027 740 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 TERF2Q15554 542 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 KIAA0319Q5VV43 1072 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 OR6B2Q6IFH4 312 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 MFSD7Q6UXD7 560 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 RTN4RL1Q86UN2 441 aaPredicted RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 MREGQ8N565 214 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 TSEN2Q8NCE0 465 aaKnown RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 SLC2A14Q8TDB8 520 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 RNF25Q96BH1 459 aaPredicted RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 RBM41Q96IZ5 413 aaKnown RBP17.42■□□□□ 0.38
PKD1-225ENST00000562297 TNIP3Q96KP6 325 aa17.42■□□□□ 0.38
PKD1-225ENST00000562297 CASTOR2A6NHX0 329 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 C3orf70A6NLC5 250 aaPredicted RBP17.41■□□□□ 0.38
PKD1-225ENST00000562297 ARVCFO00192 962 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 ADORA2BP29275 332 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
PKD1-225ENST00000562297 TAF5Q15542 800 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 ECHDC2Q86YB7 292 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 FUKQ8N0W3 1084 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 ATG4AQ8WYN0 398 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 ACSF2Q96CM8 615 aaPredicted RBP17.41■□□□□ 0.38
PKD1-225ENST00000562297 RUNDC3BQ96NL0 473 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 DCLK3Q9C098 648 aa17.41■□□□□ 0.38
PKD1-225ENST00000562297 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.41■□□□□ 0.383e-8■■■■■ 46.9
PKD1-225ENST00000562297 FAM114A2Q9NRY5 505 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms