RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 EIF3AQ14152 1382 aaKnown RBP4.49□□□□□ -1.69
HERC1-215ENST00000561436 LAMC1P11047 1609 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 CCDC78A2IDD5 438 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 MYO1FO00160 1098 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 IL18RAPO95256 599 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SBK3P0C264 359 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SPATA31D3P0C874 917 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SETSIPP0DME0 302 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 XRCC6P12956 609 aaKnown RBP eCLIP4.48□□□□□ -1.69
HERC1-215ENST00000561436 STT3AP46977 705 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 PRIM2P49643 509 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 ALDH5A1P51649 535 aaPredicted RBP4.48□□□□□ -1.69
HERC1-215ENST00000561436 CHN2P52757 468 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SLC13A2Q13183 592 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 DAG1Q14118 895 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 PDCD4Q53EL6 469 aaKnown RBP4.48□□□□□ -1.69
HERC1-215ENST00000561436 UTP14CQ5TAP6 766 aaKnown RBP4.48□□□□□ -1.69
HERC1-215ENST00000561436 C1orf228Q6PIY5 440 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SPATA31D4Q6ZUB0 917 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 VRK3Q8IV63 474 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 CCDC33Q8N5R6 958 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 DEPTORQ8TB45 409 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SLC25A43Q8WUT9 341 aaPredicted RBP4.48□□□□□ -1.69
HERC1-215ENST00000561436 MRGPRX1Q96LB2 322 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 SORCS2Q96PQ0 1159 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 CNPPD1Q9BV87 410 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 ZNF518BQ9C0D4 1074 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 PLCB1Q9NQ66 1216 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 PLEKHM1Q9Y4G2 1056 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 CEP83Q9Y592 693 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 PXDNQ92626 1479 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 UNC13BO14795 1591 aa4.48□□□□□ -1.69
HERC1-215ENST00000561436 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 POM121BA6NF01 834 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 UNC119BA6NIH7 251 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 BTN3A1O00481 513 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 TBX3O15119 743 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 KPNA5O15131 536 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 AGFG2O95081 481 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 PRSS23O95084 383 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 ITGB1P05556 798 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 GRPP07492 148 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 PARP1P09874 1014 aaKnown RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 KRT4P19013 534 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 HDCP19113 662 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 YY1P25490 414 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 PIK3CBP42338 1070 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 PHKA1P46020 1223 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 CASP5P51878 434 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 ZNF135P52742 658 aaPredicted RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 FMO1Q01740 532 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 ZNF844Q08AG5 666 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 FSTL1Q12841 308 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 ZRSR2Q15696 482 aaKnown RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 NAIF1Q69YI7 327 aaPredicted RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 Q6ZPA2 131 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 MED25Q71SY5 747 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 MPP5Q8N3R9 675 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 SDR16C5Q8N3Y7 309 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 OR2C3Q8N628 320 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 NUP133Q8WUM0 1156 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 NMD3Q96D46 503 aaKnown RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 MSLNLQ96KJ4 702 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 RIPOR3Q96MK2 946 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 P2RX7Q99572 595 aaKnown RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 ZSWIM1Q9BR11 485 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 CHMP4AQ9BY43 222 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 IMPG2Q9BZV3 1241 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 CERS4Q9HA82 394 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 GPR35Q9HC97 309 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 AURKAIP1Q9NWT8 199 aaPredicted RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 ZSCAN32Q9NX65 697 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 ANKFY1Q9P2R3 1169 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 TAGLN3Q9UI15 199 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 TMX2Q9Y320 296 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 USP15Q9Y4E8 981 aaPredicted RBP4.47□□□□□ -1.69
HERC1-215ENST00000561436 NINLQ9Y2I6 1382 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 CDC42BPGQ6DT37 1551 aa4.47□□□□□ -1.69
HERC1-215ENST00000561436 USP19O94966 1318 aa4.46□□□□□ -1.69
HERC1-215ENST00000561436 SPATA31A5Q5VU36 1347 aa4.46□□□□□ -1.69
HERC1-215ENST00000561436 SPATA31A7Q8IWB4 1347 aa4.46□□□□□ -1.69
HERC1-215ENST00000561436 NAIPQ13075 1403 aa4.46□□□□□ -1.69
HERC1-215ENST00000561436 ANKARQ7Z5J8 1434 aa4.46□□□□□ -1.69
HERC1-215ENST00000561436 GPRASP1Q5JY77 1395 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 DHX57Q6P158 1386 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 TRIM43BA6NCK2 446 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 DIRC3C9JPN6 131 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 M0QYG6 137 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 THAP12O43422 761 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 RECQL4O94761 1208 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 INMTO95050 263 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 UNC5CO95185 931 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 NDUFA10O95299 355 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 ADH4P08319 380 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 TNFSF4P23510 183 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 HMGB2P26583 209 aaKnown RBP4.46□□□□□ -1.7
HERC1-215ENST00000561436 MCM7P33993 719 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 HMGA2P52926 109 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 ARFIP2P53365 341 aa4.46□□□□□ -1.7
HERC1-215ENST00000561436 ZNF543Q08ER8 600 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms