RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MAP3K19Q56UN5 1328 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 RGPD3A6NKT7 1758 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 RGPD4Q7Z3J3 1758 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 CDHR4A6H8M9 788 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 WNT10BO00744 389 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 PMM2O15305 246 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 HAUS5O94927 633 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 AHSGP02765 367 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 HRGP04196 525 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 ITGB1P05556 798 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 GJB1P08034 283 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 SBK3P0C264 359 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 PHKG2P15735 406 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 ACO1P21399 889 aaKnown RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 HIBADHP31937 336 aaKnown RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NEK3P51956 506 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NKX6-1P78426 367 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 DACT2Q5SW24 774 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 PPP1R3BQ86XI6 285 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 DCBLD1Q8N8Z6 715 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 IL17RDQ8NFM7 739 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NEUROD6Q96NK8 337 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 LSM14BQ9BX40 385 aaKnown RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 LRRC27Q9C0I9 530 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NUP62CLQ9H1M0 184 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 KCNH6Q9H252 994 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 BHMT2Q9H2M3 363 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 ZMAT3Q9HA38 289 aaKnown RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 RSAD1Q9HA92 442 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 ZNF287Q9HBT7 754 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 KIAA1586Q9HCI6 787 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 SIDT1Q9NXL6 827 aaKnown RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 EIF2B4Q9UI10 523 aaKnown RBP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.79□□□□□ -1.64
LRRC28-222ENST00000561431 SLC30A1Q9Y6M5 507 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NUP188Q5SRE5 1749 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NHSQ6T4R5 1651 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 OVOS2A0A0G2JMS6 1433 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 BCL9O00512 1426 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 NCAPD2Q15021 1401 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 SBF2Q86WG5 1849 aa4.79□□□□□ -1.64
LRRC28-222ENST00000561431 RGPD2P0DJD1 1756 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 GOLGA6L6A8MZA4 724 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 GPR42O15529 346 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ZNF623O75123 536 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 BRAFP15056 766 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ZKSCAN1P17029 563 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 SOX8P57073 446 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 EXOSC9Q06265 439 aaKnown RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 DUSP8Q13202 625 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 IFIT5Q13325 482 aaKnown RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 RAPGEF1Q13905 1077 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 GALEQ14376 348 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 KCTD2Q14681 263 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 POLD3Q15054 466 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 L1TD1Q5T7N2 865 aaKnown RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 UTP14CQ5TAP6 766 aaKnown RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 TOM1L2Q6ZVM7 507 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 USP51Q70EK9 711 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 DEFB132Q7Z7B7 95 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 CREBRFQ8IUR6 639 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 FAM43AQ8N2R8 423 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 MDGA1Q8NFP4 955 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 PARD3BQ8TEW8 1205 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 IP6K1Q92551 441 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 COG3Q96JB2 828 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ADOQ96SZ5 270 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 NDC1Q9BTX1 674 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 GPR87Q9BY21 358 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 IMPG2Q9BZV3 1241 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 VPS11Q9H270 941 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 MRPL46Q9H2W6 279 aaKnown RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ZHX3Q9H4I2 956 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 DDX21Q9NR30 783 aaKnown RBP eCLIP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 JKAMPQ9P055 326 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 ZNF69Q9UC07 566 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 TCAF1Q9Y4C2 921 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 SMG6Q86US8 1419 aaKnown RBP4.78□□□□□ -1.64
LRRC28-222ENST00000561431 KIF24Q5T7B8 1368 aa4.78□□□□□ -1.64
LRRC28-222ENST00000561431 MEGF6O75095 1541 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 PNPLA7Q6ZV29 1317 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 ANO9A1A5B4 782 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 ZNF785A8K8V0 405 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 RHPN2P1A8MT19 583 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 MYO1CO00159 1063 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 DHX16O60231 1041 aaKnown RBP4.77□□□□□ -1.65
LRRC28-222ENST00000561431 TBC1D4O60343 1298 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 SLC43A1O75387 559 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 AGFG2O95081 481 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 TGM1P22735 817 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 SLC6A2P23975 617 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 HOXC9P31274 260 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 MAN2A2P49641 1150 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 CHN2P52757 468 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 MXRA7P84157 204 aa4.77□□□□□ -1.65
LRRC28-222ENST00000561431 KLF10Q13118 480 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms