RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CASP14P31944 242 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 LHX1P48742 406 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 GLUD2P49448 558 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 DBN1Q16643 649 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 TMEM270Q6UE05 265 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 RSPO2Q6UXX9 243 aaPredicted RBP12.36□□□□□ -0.43
HERC1-214ENST00000561400 METTL23Q86XA0 190 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 CCDC112Q8NEF3 446 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 OR10T2Q8NGX3 314 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 GDPD5Q8WTR4 605 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 TMEM209Q96SK2 561 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 SNX25Q9H3E2 840 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 CAPN11Q9UMQ6 739 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 PCDHB4Q9Y5E5 795 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.36□□□□□ -0.437e-7■■□□□ 13
HERC1-214ENST00000561400 REV3LO60673 3130 aa12.36□□□□□ -0.43
HERC1-214ENST00000561400 A8MXQ7 604 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 TIMM44O43615 452 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 TBC1D4O60343 1298 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 LILRB3O75022 631 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 ATP2C2O75185 946 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 CTSAP10619 480 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 RAD23BP54727 409 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 UBE3AQ05086 875 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 CCDC142Q17RM4 750 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 ZFYVE27Q5T4F4 411 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 ANKS3Q6ZW76 656 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 SPAG5Q96R06 1193 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 FAM124BQ9H5Z6 455 aaPredicted RBP12.35□□□□□ -0.43
HERC1-214ENST00000561400 ACP6Q9NPH0 428 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 RABL2BQ9UNT1 228 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 DAAM1Q9Y4D1 1078 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 PCDHGC5Q9Y5F6 944 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 MYH10P35580 1976 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 A0A1W2PQJ5 194 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 CALCAP01258 141 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 URODP06132 367 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 KRT5P13647 590 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 RPL17P18621 184 aaKnown RBP12.35□□□□□ -0.43
HERC1-214ENST00000561400 IRS1P35568 1242 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 CDR1P51861 262 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 GOLGA8FQ08AF8 430 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 GOLGA8DPQ0D2H9 430 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 PTPN14Q15678 1187 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 PSMD5Q16401 504 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 UNC93AQ86WB7 457 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 REXO1L1PQ8IX06 675 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 SLC4A11Q8NBS3 891 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 SPC24Q8NBT2 197 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 RBBP8NLQ8NC74 664 aaPredicted RBP12.35□□□□□ -0.43
HERC1-214ENST00000561400 TCF25Q9BQ70 676 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
HERC1-214ENST00000561400 TMEM165Q9HC07 324 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
HERC1-214ENST00000561400 G3BP2Q9UN86 482 aaKnown RBP12.35□□□□□ -0.43
HERC1-214ENST00000561400 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 ADAM12O43184 909 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 LPXNO60711 386 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 RTN3O95197 1032 aaPredicted RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 GCKP35557 465 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 ZNF132P52740 706 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 YWHAEP62258 255 aaKnown RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 E4F1Q66K89 784 aaPredicted RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 ACOT1Q86TX2 421 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 PPFIBP1Q86W92 1011 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 TTC30AQ86WT1 665 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 THEM5Q8N1Q8 247 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 EZH1Q92800 747 aaPredicted RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 IQCDQ96DY2 449 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 CLSTN3Q9BQT9 956 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 ACBD6Q9BR61 282 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 NT5C1AQ9BXI3 368 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 KIF9Q9HAQ2 790 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 MTRRQ9UBK8 725 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
HERC1-214ENST00000561400 PTPRDP23468 1912 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 HIDE1A8MVS5 230 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 CYP26A1O43174 497 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 GFPT2O94808 682 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 CXCL14O95715 111 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 OR4Q2P0C623 313 aa12.34□□□□□ -0.43
HERC1-214ENST00000561400 KRT9P35527 623 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms