RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 GABRDO14764 452 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 SLC16A3O15427 465 aaKnown RBP4.28□□□□□ -1.72
USP8-216ENST00000561206 PIM1P11309 404 aaPredicted RBP4.28□□□□□ -1.72
USP8-216ENST00000561206 CYP4F2P78329 520 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 NOGQ13253 232 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 TREML2Q5T2D2 321 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 EFCAB2Q5VUJ9 269 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 ICE2Q659A1 982 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 SFRP4Q6FHJ7 346 aaPredicted RBP4.28□□□□□ -1.72
USP8-216ENST00000561206 TNPO1Q92973 898 aaKnown RBP4.28□□□□□ -1.72
USP8-216ENST00000561206 FSD1LQ9BXM9 530 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 DUSP22Q9NRW4 184 aa4.28□□□□□ -1.72
USP8-216ENST00000561206 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.28□□□□□ -1.72
USP8-216ENST00000561206 FEZ2Q9UHY8 353 aaPredicted RBP4.28□□□□□ -1.72
USP8-216ENST00000561206 PRSS47A8MTI9 375 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 SLC16A6O15403 523 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 GAS8-AS1O95177 125 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 PPIFP30405 207 aaKnown RBP4.27□□□□□ -1.73
USP8-216ENST00000561206 NPY5RQ15761 445 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 PCID2Q5JVF3 399 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 THEMIS2Q5TEJ8 643 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 FAM160B1Q5W0V3 765 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 CHSY1Q86X52 802 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 CNGA4Q8IV77 575 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 MTMR8Q96EF0 704 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 MACROD1Q9BQ69 325 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 MRPL46Q9H2W6 279 aaKnown RBP4.27□□□□□ -1.73
USP8-216ENST00000561206 PDGFCQ9NRA1 345 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 PCDHA3Q9Y5H8 950 aa4.27□□□□□ -1.73
USP8-216ENST00000561206 ZRANB2O95218 330 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP8-216ENST00000561206 FESP07332 822 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 ENGP17813 658 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 HK3P52790 923 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 LOXL3P58215 753 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 HOXA4Q00056 320 aaPredicted RBP4.26□□□□□ -1.73
USP8-216ENST00000561206 SP2Q02086 613 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 SRSF1Q07955 248 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP8-216ENST00000561206 ODF1Q14990 250 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 EGFLAMQ63HQ2 1017 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 NAPRTQ6XQN6 538 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 HEATR3Q7Z4Q2 680 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 PNMA8AQ86V59 439 aaPredicted RBP4.26□□□□□ -1.73
USP8-216ENST00000561206 PPP1R3BQ86XI6 285 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 LRRC71Q8N4P6 559 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 CPA6Q8N4T0 437 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP8-216ENST00000561206 PNLDC1Q8NA58 520 aaKnown RBP4.26□□□□□ -1.73
USP8-216ENST00000561206 FAM46DQ8NEK8 389 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 RP9Q8TA86 221 aaKnown RBP4.26□□□□□ -1.73
USP8-216ENST00000561206 CYP2W1Q8TAV3 490 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 NR4A3Q92570 626 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 RITA1Q96K30 269 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 C5orf34Q96MH7 638 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 SLC46A1Q96NT5 459 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 ASB2Q96Q27 587 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 SLC13A1Q9BZW2 595 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 CCDC8Q9H0W5 538 aaPredicted RBP4.26□□□□□ -1.73
USP8-216ENST00000561206 ABCF2Q9UG63 623 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 SERTAD3Q9UJW9 196 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 ADAMTS5Q9UNA0 930 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
USP8-216ENST00000561206 WDR17Q8IZU2 1322 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 H7C1Q1 480 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 DCLK1O15075 740 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 DTNBO60941 627 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 TJP3O95049 919 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 AHSGP02765 367 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 NPSP0C0P6 89 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 ATXN1LP0C7T5 689 aaKnown RBP4.25□□□□□ -1.73
USP8-216ENST00000561206 GUCY2FP51841 1108 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 RHDQ02161 417 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 ITKQ08881 620 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 SHC4Q6S5L8 630 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 KIRREL2Q6UWL6 708 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 TRIM72Q6ZMU5 477 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 DCP1BQ8IZD4 617 aaKnown RBP4.25□□□□□ -1.73
USP8-216ENST00000561206 MIER2Q8N344 545 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 ATG4AQ8WYN0 398 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 TTYH3Q9C0H2 523 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 USP35Q9P2H5 1018 aa4.25□□□□□ -1.73
USP8-216ENST00000561206 ERC2O15083 957 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 ABLIM3O94929 683 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 TOMM40O96008 361 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 PRF1P14222 555 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 TYRP14679 529 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 PXNP49023 591 aaPredicted RBP4.24□□□□□ -1.73
USP8-216ENST00000561206 GTF2H3Q13889 308 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 RBMS2Q15434 407 aaKnown RBP4.24□□□□□ -1.73
USP8-216ENST00000561206 TRIM71Q2Q1W2 868 aaKnown RBP4.24□□□□□ -1.73
USP8-216ENST00000561206 LONRF3Q496Y0 759 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 ARHGAP40Q5TG30 622 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 EMC10Q5UCC4 262 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 FAM167AQ96KS9 214 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 PTDSS2Q9BVG9 487 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 GLOD4Q9HC38 313 aa4.24□□□□□ -1.73
USP8-216ENST00000561206 NTN3O00634 580 aaPredicted RBP4.23□□□□□ -1.73
USP8-216ENST00000561206 KATNA1O75449 491 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms