RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 ZC3H3Q8IXZ2 948 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CMTM8Q8IZV2 173 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 ATOH1Q92858 354 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 SYAP1Q96A49 352 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 TRMT2BQ96GJ1 504 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 MYRFLQ96LU7 910 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CYP2S1Q96SQ9 504 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 SNX25Q9H3E2 840 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 HPS4Q9NQG7 708 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 GTSE1Q9NYZ3 720 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 MAN1B1Q9UKM7 699 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 PIAS3Q9Y6X2 628 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF638Q14966 1978 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 A8MXQ7 604 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ARSAP15289 507 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 PGFP49763 221 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 RPL10AP62906 217 aaKnown RBP13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 PFKPQ01813 784 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 GAS6Q14393 721 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF667Q5HYK9 610 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ANKRD40Q6AI12 368 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ZMIZ2Q8NF64 920 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 ARID3AQ99856 593 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 BCO2Q9BYV7 579 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 TRPC7Q9HCX4 862 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 C2orf42Q9NWW7 574 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 MAGEC2Q9UBF1 373 aaPredicted RBP13.5□□□□□ -0.25
CHRNA3-208ENST00000561128 MYO16Q9Y6X6 1858 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 SCAMP3O14828 347 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF263O14978 683 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 MAPK13O15264 365 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CHADO15335 359 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 BEST1O76090 585 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CLSTN1O94985 981 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 FGF19O95750 216 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CCNE1P24864 410 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 NDST1P52848 882 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 USP4Q13107 963 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 ADAM9Q13443 819 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 TAF12Q16514 161 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 EDRF1Q3B7T1 1238 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CBWD6Q4V339 395 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 ARHGAP15Q53QZ3 475 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CBWD3Q5JTY5 395 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CBWD5Q5RIA9 395 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 C4orf50Q6ZRC1 276 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 Q6ZS52 159 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 GPRIN1Q7Z2K8 1008 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 ARL14EPQ8N8R7 260 aaPredicted RBP13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 BPIFB1Q8TDL5 484 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 WHAMMQ8TF30 809 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 CCDC47Q96A33 483 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 PRRX2Q99811 253 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 TTLL2Q9BWV7 592 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 FAM49BQ9NUQ9 324 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 FRMD4BQ9Y2L6 1034 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 R3HCC1Q9Y3T6 440 aaKnown RBP13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 R4GN57 208 aa13.49□□□□□ -0.25
CHRNA3-208ENST00000561128 BIN1O00499 593 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 WEE1P30291 646 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 CTHP32929 405 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 GRIK1P39086 918 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 NBL1P41271 181 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 NUBP1P53384 320 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 MCCD1P59942 119 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 IFRD2Q12894 506 aaPredicted RBP13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 ZNF77Q15935 545 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 TSSK4Q6SA08 328 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 SCAMP5Q8TAC9 235 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 IRF7Q92985 503 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 SMARCE1Q969G3 411 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 CLDN23Q96B33 292 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 SHDQ96IW2 340 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 SPATA17Q96L03 361 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 GSDMAQ96QA5 445 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 SMOQ99835 787 aa13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 DUSP9Q99956 384 aaKnown RBP13.48□□□□□ -0.25
CHRNA3-208ENST00000561128 ELOVL4Q9GZR5 314 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms