RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 UNKLQ9H9P5 680 aaKnown RBP6.63□□□□□ -1.35
MARK3-220ENST00000560417 TMEM8AQ9HCN3 771 aa6.63□□□□□ -1.35
MARK3-220ENST00000560417 SMPD4Q9NXE4 827 aa6.63□□□□□ -1.35
MARK3-220ENST00000560417 MRPS17Q9Y2R5 130 aaKnown RBP6.63□□□□□ -1.35
MARK3-220ENST00000560417 hCG_1642624A0A1W2PR95 340 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 AQP7P3A6NL99 342 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 HLA-DOAP06340 250 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 GATA3P23771 443 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 SATB1Q01826 763 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 FPGSQ05932 587 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 RESTQ13127 1097 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 PTK2BQ14289 1009 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 ELF2Q15723 593 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 VPS53Q5VIR6 699 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 SFRP4Q6FHJ7 346 aaPredicted RBP6.62□□□□□ -1.35
MARK3-220ENST00000560417 FBXO38Q6PIJ6 1188 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 CRTC1Q6UUV9 634 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 CCDC150Q8NCX0 1101 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 MUL1Q969V5 352 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 MYEOVQ96EZ4 313 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 ALOXE3Q9BYJ1 711 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 GALNT9Q9HCQ5 603 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 OBP2BQ9NPH6 170 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 IGSF9Q9P2J2 1179 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 SSX2IPQ9Y2D8 614 aa6.62□□□□□ -1.35
MARK3-220ENST00000560417 A0A0B4J269 797 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 TMEM200CA6NKL6 621 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 F5H697 171 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 SYT5O00445 386 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 CDKL5O76039 1030 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 VEGFAP15692 232 aaPredicted RBP6.61□□□□□ -1.35
MARK3-220ENST00000560417 TUBB3Q13509 450 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 SPARCL1Q14515 664 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 KCNAB1Q14722 419 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 MAPKAPK3Q16644 382 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 SPDYE7PQ495Y7 208 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 FBLN7Q53RD9 439 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 RBM20Q5T481 1227 aaKnown RBP6.61□□□□□ -1.35
MARK3-220ENST00000560417 MANEALQ5VSG8 457 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 RAP1GAP2Q684P5 730 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 USP49Q70CQ1 688 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 C1orf210Q8IVY1 113 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 CPEB3Q8NE35 698 aaKnown RBP6.61□□□□□ -1.35
MARK3-220ENST00000560417 MYRIPQ8NFW9 859 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 SMCR8Q8TEV9 937 aaPredicted RBP6.61□□□□□ -1.35
MARK3-220ENST00000560417 EXTL1Q92935 676 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 DVL3Q92997 716 aaPredicted RBP6.61□□□□□ -1.35
MARK3-220ENST00000560417 TMEM125Q96AQ2 219 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 RNF31Q96EP0 1072 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 FAM227BQ96M60 508 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 RMDN3Q96TC7 470 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 INTS13Q9NVM9 706 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 PARPBPQ9NWS1 579 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 ZMYND8Q9ULU4 1186 aaPredicted RBP6.61□□□□□ -1.35
MARK3-220ENST00000560417 NOX1Q9Y5S8 564 aa6.61□□□□□ -1.35
MARK3-220ENST00000560417 FER1L4A9Z1Z3 1794 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 OR2W5A6NFC9 320 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 LGALS16A8MUM7 142 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 TRIAP1O43715 76 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 TLR5O60602 858 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 PIAS2O75928 621 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 ATICP31939 592 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 SERPINF1P36955 418 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 MAGEA10P43363 369 aaPredicted RBP6.6□□□□□ -1.35
MARK3-220ENST00000560417 SCAPQ12770 1279 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 FOXO1Q12778 655 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 RAPGEF1Q13905 1077 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 E2F2Q14209 437 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 SLC5A9Q2M3M2 681 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 PTCHD3Q3KNS1 767 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 PREPLQ4J6C6 727 aaPredicted RBP6.6□□□□□ -1.35
MARK3-220ENST00000560417 USP39Q53GS9 565 aaKnown RBP6.6□□□□□ -1.35
MARK3-220ENST00000560417 TMTC4Q5T4D3 741 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 ARHGAP40Q5TG30 622 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 CACHD1Q5VU97 1274 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 ICE2Q659A1 982 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 ARL6IP4Q66PJ3 421 aaKnown RBP6.6□□□□□ -1.35
MARK3-220ENST00000560417 GGT6Q6P531 493 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 CCDC28AQ8IWP9 274 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 COLGALT2Q8IYK4 626 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 ZNF276Q8N554 614 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 MYCT1Q8N699 235 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 FAM71BQ8TC56 605 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 IPO4Q8TEX9 1081 aaKnown RBP6.6□□□□□ -1.35
MARK3-220ENST00000560417 PPP2R3CQ969Q6 453 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 CDK5RAP1Q96SZ6 601 aaKnown RBP6.6□□□□□ -1.35
MARK3-220ENST00000560417 AMBRA1Q9C0C7 1298 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.6□□□□□ -1.358e-8■□□□□ 10.8
MARK3-220ENST00000560417 PCDHAC1Q9H158 963 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 LUZP4Q9P127 313 aa6.6□□□□□ -1.35
MARK3-220ENST00000560417 AQP12BA6NM10 295 aa6.59□□□□□ -1.35
MARK3-220ENST00000560417 CD3EAPO15446 510 aaKnown RBP6.59□□□□□ -1.35
MARK3-220ENST00000560417 FOXD2O60548 495 aaPredicted RBP6.59□□□□□ -1.35
MARK3-220ENST00000560417 NDUFA10O95299 355 aa6.59□□□□□ -1.35
MARK3-220ENST00000560417 ITGA5P08648 1049 aa6.59□□□□□ -1.35
MARK3-220ENST00000560417 IDEP14735 1019 aa6.59□□□□□ -1.35
MARK3-220ENST00000560417 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.35
MARK3-220ENST00000560417 MST1P26927 711 aa6.59□□□□□ -1.35
MARK3-220ENST00000560417 CD6P30203 668 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms