RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 GAREM2Q75VX8 874 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 UNC93AQ86WB7 457 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 LMO3Q8TAP4 145 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 FGF14Q92915 247 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 FUBP3Q96I24 572 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP3-217ENST00000560070 GCNAQ96QF7 691 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 CYP2S1Q96SQ9 504 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 SMOQ99835 787 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 PLA2G2FQ9BZM2 168 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 SMG9Q9H0W8 520 aaKnown RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 NDST4Q9H3R1 872 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 TRPC7Q9HCX4 862 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 ABCB6Q9NP58 842 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 TMEM30AQ9NV96 361 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 EPS15L1Q9UBC2 864 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 HSFX1Q9UBD0 423 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 CHORDC1Q9UHD1 332 aaPredicted RBP9.09□□□□□ -0.95
USP3-217ENST00000560070 NUMBLQ9Y6R0 609 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 KIAA1671Q9BY89 1806 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 MYO9BQ13459 2157 aa9.09□□□□□ -0.95
USP3-217ENST00000560070 RALGAPA2Q2PPJ7 1873 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 EYSQ5T1H1 3165 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 SPTBN5Q9NRC6 3674 aaKnown RBP9.08□□□□□ -0.96
USP3-217ENST00000560070 PI4K2BG5E9Z4 385 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
USP3-217ENST00000560070 STK25O00506 426 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 P4HA2O15460 535 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 LETM1O95202 739 aaPredicted RBP9.08□□□□□ -0.96
USP3-217ENST00000560070 F11P03951 625 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 CFHP08603 1231 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 POU2F2P09086 479 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 KRT5P13647 590 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 TRIM21P19474 475 aaKnown RBP9.08□□□□□ -0.96
USP3-217ENST00000560070 MAGEA11P43364 429 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 RAD23BP54727 409 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 USP46P62068 366 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 ZXDAP98168 799 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 GRM2Q14416 872 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 MAN2A1Q16706 1144 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 PTPN21Q16825 1174 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 KLHL40Q2TBA0 621 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 ARHGAP15Q53QZ3 475 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 TCP11X2Q5H9J9 407 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 CT47A1Q5JQC4 288 aaPredicted RBP9.08□□□□□ -0.96
USP3-217ENST00000560070 TXNDC8Q6A555 127 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 TMEM270Q6UE05 265 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 VSTM1Q6UX27 236 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 GBP6Q6ZN66 633 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 MAB21L3Q8N8X9 362 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 SLC4A11Q8NBS3 891 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 SCAMP5Q8TAC9 235 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 UBA3Q8TBC4 463 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 ZSCAN18Q8TBC5 510 aaPredicted RBP9.08□□□□□ -0.96
USP3-217ENST00000560070 C8orf48Q96LL4 319 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 SLC46A2Q9BY10 475 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 KRT82Q9NSB4 513 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 GCNT4Q9P109 453 aa9.08□□□□□ -0.96
USP3-217ENST00000560070 ATP8B3O60423 1300 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 NLRC5Q86WI3 1866 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 DPYSL4O14531 572 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 TRIM66O15016 1216 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 PMM2O15305 246 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 FAM200BP0CF97 657 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 ALADP13716 330 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 PTMSP20962 102 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 PON1P27169 355 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 CDC25CP30307 473 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 EPHA5P54756 1037 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 YWHAEP62258 255 aaKnown RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 GPC5P78333 572 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 MYL5Q02045 173 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 INCA1Q0VD86 236 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 TDGQ13569 410 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 KRT31Q15323 416 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 GOLGA7BQ2TAP0 167 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 SKOR2Q2VWA4 1001 aaPredicted RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 MIIPQ5JXC2 388 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 DENND5BQ6ZUT9 1274 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 TMEM150AQ86TG1 271 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 ARID3BQ8IVW6 561 aaPredicted RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 LEMD2Q8NC56 503 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 TTC8Q8TAM2 541 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 MRPS31Q92665 395 aaKnown RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 EDAQ92838 391 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 SPATA17Q96L03 361 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 KREMEN1Q96MU8 473 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 HNRNPABQ99729 332 aaKnown RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 DNAI2Q9GZS0 605 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 IL21Q9HBE4 155 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 ZFP14Q9HCL3 533 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 AVENQ9NQS1 362 aaPredicted RBP9.07□□□□□ -0.96
USP3-217ENST00000560070 GDE1Q9NZC3 331 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 FBXL21Q9UKT6 434 aa9.07□□□□□ -0.96
USP3-217ENST00000560070 SORCS3Q9UPU3 1222 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms