RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NT5C2P49902 561 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 DGKDQ16760 1214 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 FAM98BQ52LJ0 330 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 SPATA4Q8NEY3 305 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 C18orf8Q96DM3 657 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 BDH2Q9BUT1 245 aa14.35□□□□□ -0.11
CSPG4P12-202ENST00000559989 RAD51BO15315 384 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 PHGDHO43175 533 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 EPB41L4BQ9H329 900 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 TBC1D22BQ9NU19 505 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ANAPC2Q9UJX6 822 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 DYRK1BQ9Y463 629 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 TRAPPC8Q9Y2L5 1435 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 CLRN2A0PK11 232 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 MTSS1O43312 755 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 FAM58BPP0C7Q3 252 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SCP2P22307 547 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 PDK1Q15118 436 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 STILQ15468 1287 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 FBXO31Q5XUX0 539 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 NANOGNBQ7Z5D8 188 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SETD9Q8NE22 299 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ENTPD7Q9NQZ7 604 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ATP13A5Q4VNC0 1218 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SAMD3Q8N6K7 520 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF483Q8TF39 744 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZCCHC18P0CG32 403 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 HSD3B2P26439 372 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 GEMIN4P57678 1058 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 MSANTD1Q6ZTZ1 278 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 DKK3Q9UBP4 350 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 RAD54BQ9Y620 910 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SH2B2O14492 632 aaPredicted RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 CIAO1O76071 339 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 UTP15Q8TED0 518 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SRP54P61011 504 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 NFYCQ13952 458 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 R3HDM1Q15032 1099 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 IRAK1BP1Q5VVH5 260 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 RPTNQ6XPR3 784 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 EDC3Q96F86 508 aaKnown RBP14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 SYNPO2Q9UMS6 1093 aa14.34□□□□□ -0.11
CSPG4P12-202ENST00000559989 C2orf81A6NN90 581 aa14.33□□□□□ -0.11
CSPG4P12-202ENST00000559989 PCNAP12004 261 aa14.33□□□□□ -0.11
CSPG4P12-202ENST00000559989 ADARP55265 1226 aaKnown RBP14.33□□□□□ -0.11
CSPG4P12-202ENST00000559989 USP17L2Q6R6M4 530 aa14.33□□□□□ -0.11
CSPG4P12-202ENST00000559989 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.11
CSPG4P12-202ENST00000559989 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.11
CSPG4P12-202ENST00000559989 NPR3P17342 541 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 SSTR3P32745 418 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 ACLYP53396 1101 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 HSF2Q03933 536 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 ITGA9Q13797 1035 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 B3GALT6Q96L58 329 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 C1QTNF1Q9BXJ1 281 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 PCDHA6Q9UN73 950 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 PCDHA8Q9Y5H6 950 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 OR6A2O95222 327 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 DSG3P32926 999 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TRPC4APQ8TEL6 797 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 CENPIQ92674 756 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 ROGDIQ9GZN7 287 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 DCLRE1BQ9H816 532 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 ABT1Q9ULW3 272 aaKnown RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TMEM120BA0PK00 339 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 GDF11O95390 407 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TCF4P15884 667 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZNF746Q6NUN9 644 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 PPP1R14BQ96C90 147 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 CRLS1Q9UJA2 301 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC16A4O15374 487 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 IDH3BO43837 385 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TPST1O60507 370 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 FKBP6O75344 327 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 RASA1P20936 1047 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 HNRNPH1P31943 449 aaKnown RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 PRCPP42785 496 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 TIMM50Q3ZCQ8 353 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC25A41Q8N5S1 370 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 POLR3FQ9H1D9 316 aaPredicted RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 C8orf4Q9NR00 106 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 BCLAF3A2AJT9 711 aaKnown RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 NQO1P15559 274 aaKnown RBP14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 CYP24A1Q07973 514 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 PLA2G4FQ68DD2 849 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms