RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CDH9Q9ULB4 789 aa17.54■□□□□ 0.4
TPM1-219ENST00000559397 SSX2IPQ9Y2D8 614 aa17.54■□□□□ 0.4
TPM1-219ENST00000559397 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
TPM1-219ENST00000559397 OR6C75A6NL08 312 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 RFXAPO00287 272 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 BUB1O43683 1085 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 ATP2C2O75185 946 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 CXCL14O95715 111 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 ATP1A1P05023 1023 aaKnown RBP17.53■□□□□ 0.4
TPM1-219ENST00000559397 PCSK1P29120 753 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 IRS1P35568 1242 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 TCEAL1Q15170 157 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 INTS6LQ5JSJ4 861 aaKnown RBP17.53■□□□□ 0.4
TPM1-219ENST00000559397 CLSTN3Q9BQT9 956 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 ZCWPW1Q9H0M4 648 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 LMAN2LQ9H0V9 348 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 NGRNQ9NPE2 291 aaKnown RBP17.53■□□□□ 0.4
TPM1-219ENST00000559397 CRTAC1Q9NQ79 661 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 ENTPD7Q9NQZ7 604 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 SEPT11Q9NVA2 429 aaKnown RBP17.53■□□□□ 0.4
TPM1-219ENST00000559397 SZT2Q5T011 3432 aa17.53■□□□□ 0.4
TPM1-219ENST00000559397 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 ADAM12O43184 909 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 FTLP02792 175 aaPredicted RBP17.52■□□□□ 0.4
TPM1-219ENST00000559397 PAEPP09466 180 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 RPL17P18621 184 aaKnown RBP17.52■□□□□ 0.4
TPM1-219ENST00000559397 PSMC1P62191 440 aaKnown RBP17.52■□□□□ 0.4
TPM1-219ENST00000559397 SMC1AQ14683 1233 aaKnown RBP17.52■□□□□ 0.4
TPM1-219ENST00000559397 IFI16Q16666 785 aaKnown RBP17.52■□□□□ 0.4
TPM1-219ENST00000559397 SLC8B1Q6J4K2 584 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 FAM171BQ6P995 826 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 ACOT1Q86TX2 421 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 LRRTM3Q86VH5 581 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 MRPL43Q8N983 215 aaKnown RBP17.52■□□□□ 0.4
TPM1-219ENST00000559397 B3GALNT2Q8NCR0 500 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 LRCH3Q96II8 777 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 LPIN3Q9BQK8 851 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 SYT15Q9BQS2 421 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.52■□□□□ 0.4
TPM1-219ENST00000559397 FNIP2Q9P278 1114 aa17.52■□□□□ 0.4
TPM1-219ENST00000559397 MYBPHLA2RUH7 354 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 GRID2IPA4D2P6 1211 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 C2orf71A6NGG8 1288 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 ENC1O14682 589 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 PRLRP16471 622 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 PTPN1P18031 435 aaKnown RBP17.52■□□□□ 0.39
TPM1-219ENST00000559397 CCDC142Q17RM4 750 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 PLPP4Q5VZY2 271 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 PDE12Q6L8Q7 609 aaKnown RBP17.52■□□□□ 0.39
TPM1-219ENST00000559397 C12orf29Q8N999 325 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 CTNNBL1Q8WYA6 563 aaPredicted RBP17.52■□□□□ 0.39
TPM1-219ENST00000559397 RFFLQ8WZ73 363 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 TNIP3Q96KP6 325 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.39
TPM1-219ENST00000559397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.51■□□□□ 0.39
TPM1-219ENST00000559397 HIDE1A8MVS5 230 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 TEX28O15482 410 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 PALMO75781 387 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 CSPG5O95196 566 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 CALCAP01258 141 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 OR4Q2P0C623 313 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 UNGP13051 313 aaPredicted RBP17.51■□□□□ 0.39
TPM1-219ENST00000559397 HADHBP55084 474 aaKnown RBP17.51■□□□□ 0.39
TPM1-219ENST00000559397 TSPY1Q01534 308 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 CREMQ03060 361 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 ACAD10Q6JQN1 1059 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 LRRC57Q8N9N7 239 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 TPCN2Q8NHX9 752 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 HEXIM2Q96MH2 286 aaKnown RBP17.51■□□□□ 0.39
TPM1-219ENST00000559397 CARD6Q9BX69 1037 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 TMLHEQ9NVH6 421 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 GTF3C4Q9UKN8 822 aa17.51■□□□□ 0.39
TPM1-219ENST00000559397 CYP1A1P04798 512 aaPredicted RBP17.5■□□□□ 0.39
TPM1-219ENST00000559397 CNPP09543 421 aaKnown RBP17.5■□□□□ 0.39
TPM1-219ENST00000559397 GNA15P30679 374 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 OR1D2P34982 312 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 NAP1L1P55209 391 aaKnown RBP17.5■□□□□ 0.39
TPM1-219ENST00000559397 WHAMMP3Q1A5X7 153 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 TRIM72Q6ZMU5 477 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 SLFN11Q7Z7L1 901 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 LRRN4CLQ8ND94 238 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 MYCBPAPQ8TBZ2 947 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 ARHGEF26Q96DR7 871 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 KLHL5Q96PQ7 755 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 ZSWIM1Q9BR11 485 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 TLR10Q9BXR5 811 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 THAP2Q9H0W7 228 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 KIAA1257Q9ULG3 409 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 SNX12Q9UMY4 172 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 SAR1BQ9Y6B6 198 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 MYO9BQ13459 2157 aa17.5■□□□□ 0.39
TPM1-219ENST00000559397 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 DYNC1I1O14576 645 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 VDRP11473 427 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 ABCB4P21439 1286 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 GPC5P78333 572 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 ROR1Q01973 937 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 GPR17Q13304 367 aa17.49■□□□□ 0.39
TPM1-219ENST00000559397 RAB33AQ14088 237 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms