RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 TTC8Q8TAM2 541 aa18.96■□□□□ 0.63
TPM1-218ENST00000559281 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
TPM1-218ENST00000559281 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
TPM1-218ENST00000559281 CRTAC1Q9NQ79 661 aa18.96■□□□□ 0.63
TPM1-218ENST00000559281 PRMT8Q9NR22 394 aaPredicted RBP18.96■□□□□ 0.63
TPM1-218ENST00000559281 FRMD4BQ9Y2L6 1034 aa18.96■□□□□ 0.63
TPM1-218ENST00000559281 TRAV19A0A0A6YYK7 116 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 A8MXQ7 604 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 USP17L7P0C7H9 530 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 PTPN1P18031 435 aaKnown RBP18.95■□□□□ 0.62
TPM1-218ENST00000559281 CXCL12P48061 93 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 SOX9P48436 509 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 CLDN10P78369 228 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 STKLD1Q8NE28 680 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 PCED1BQ96HM7 432 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 FAM83CQ9BQN1 747 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 KCTD10Q9H3F6 313 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 VRTNQ9H8Y1 702 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 TRPC7Q9HCX4 862 aa18.95■□□□□ 0.62
TPM1-218ENST00000559281 NR3C1P04150 777 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 P4HA1P13674 534 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 PPP3CCP48454 512 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 CASP4P49662 377 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 FAM160A1Q05DH4 1040 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 TNK2Q07912 1038 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 RUNX3Q13761 415 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 NCOA4Q13772 614 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 BECN1Q14457 450 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 PDGFRLQ15198 375 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 CCDC142Q17RM4 750 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 ZNF699Q32M78 642 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 ZNF667Q5HYK9 610 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 MDH1BQ5I0G3 518 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 DENND5BQ6ZUT9 1274 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 SYNPOQ8N3V7 929 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 SPEM1Q8N4L4 309 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 ZBTB44Q8NCP5 570 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 TMC2Q8TDI7 906 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 RUBCNQ92622 972 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 NELL1Q92832 810 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 EXOC4Q96A65 974 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 C8orf48Q96LL4 319 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 HINFPQ9BQA5 517 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 GZF1Q9H116 711 aaPredicted RBP18.94■□□□□ 0.62
TPM1-218ENST00000559281 XYLT2Q9H1B5 865 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 TRPM5Q9NZQ8 1165 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 CCL26Q9Y258 94 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 TSC2P49815 1807 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 FAM186AA6NE01 2351 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 CACNA1IQ9P0X4 2223 aa18.94■□□□□ 0.62
TPM1-218ENST00000559281 LRRIQ3A6PVS8 624 aaPredicted RBP18.93■□□□□ 0.62
TPM1-218ENST00000559281 IKBKBO14920 756 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 RHOBTB3O94955 611 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 C4BPAP04003 597 aaKnown RBP18.93■□□□□ 0.62
TPM1-218ENST00000559281 CKMP06732 381 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 PFKLP17858 780 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 HDCP19113 662 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 KCNB1Q14721 858 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 SGSM1Q2NKQ1 1148 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 TDRD10Q5VZ19 366 aaKnown RBP18.93■□□□□ 0.62
TPM1-218ENST00000559281 CEP135Q66GS9 1140 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 KRBA2Q6ZNG9 492 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 TNIP3Q96KP6 325 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 ELOVL4Q9GZR5 314 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 TRAF3IP3Q9Y228 551 aa18.93■□□□□ 0.62
TPM1-218ENST00000559281 RPL13P26373 211 aaKnown RBP18.92■□□□□ 0.62
TPM1-218ENST00000559281 PON2Q15165 354 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 TXNDC11Q6PKC3 985 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 B3GALNT2Q8NCR0 500 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 PLEKHO2Q8TD55 490 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 TAF4BQ92750 862 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 SECISBP2LQ93073 1101 aaKnown RBP18.92■□□□□ 0.62
TPM1-218ENST00000559281 CHAMP1Q96JM3 812 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 CYP2S1Q96SQ9 504 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 EBF3Q9H4W6 596 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 TCHHQ07283 1943 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 COL4A3Q01955 1670 aa18.92■□□□□ 0.62
TPM1-218ENST00000559281 USP34Q70CQ2 3546 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 F8VP50 259 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 MAPK13O15264 365 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 LILRB5O75023 590 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 TADA3O75528 432 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 ZNF202O95125 648 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 NOP14P78316 857 aaKnown RBP18.91■□□□□ 0.62
TPM1-218ENST00000559281 GRSF1Q12849 480 aaKnown RBP eCLIP18.91■□□□□ 0.62
TPM1-218ENST00000559281 DPYDQ12882 1025 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 MTF1Q14872 753 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 ARL14EPQ8N8R7 260 aaPredicted RBP18.91■□□□□ 0.62
TPM1-218ENST00000559281 SUMF1Q8NBK3 374 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 TTLL2Q9BWV7 592 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 ATP8B3O60423 1300 aa18.91■□□□□ 0.62
TPM1-218ENST00000559281 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
TPM1-218ENST00000559281 TRIM21P19474 475 aaKnown RBP18.9■□□□□ 0.62
TPM1-218ENST00000559281 NR1H3Q13133 447 aa18.9■□□□□ 0.62
TPM1-218ENST00000559281 NFIL3Q16649 462 aa18.9■□□□□ 0.62
TPM1-218ENST00000559281 ZACNQ401N2 412 aa18.9■□□□□ 0.62
TPM1-218ENST00000559281 TRIM68Q6AZZ1 485 aa18.9■□□□□ 0.62
TPM1-218ENST00000559281 SV2AQ7L0J3 742 aa18.9■□□□□ 0.62
TPM1-218ENST00000559281 GUF1Q8N442 669 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms