RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 STON1Q9Y6Q2 735 aa8.82□□□□□ -1
USP3-211ENST00000559257 PCP4L1A6NKN8 68 aa8.82□□□□□ -1
USP3-211ENST00000559257 A6NL46 340 aa8.82□□□□□ -1
USP3-211ENST00000559257 POTECB2RU33 542 aa8.82□□□□□ -1
USP3-211ENST00000559257 TAF4O00268 1085 aa8.82□□□□□ -1
USP3-211ENST00000559257 KPNA5O15131 536 aa8.82□□□□□ -1
USP3-211ENST00000559257 MTSS1O43312 755 aa8.82□□□□□ -1
USP3-211ENST00000559257 SPAG7O75391 227 aa8.82□□□□□ -1
USP3-211ENST00000559257 CSDE1O75534 798 aaKnown RBP8.82□□□□□ -1
USP3-211ENST00000559257 FOSP01100 380 aaPredicted RBP8.82□□□□□ -1
USP3-211ENST00000559257 COPB1P53618 953 aaKnown RBP8.82□□□□□ -1
USP3-211ENST00000559257 COPAP53621 1224 aa8.82□□□□□ -1
USP3-211ENST00000559257 TAP1Q03518 808 aa8.82□□□□□ -1
USP3-211ENST00000559257 DLG1Q12959 904 aa8.82□□□□□ -1
USP3-211ENST00000559257 TAF12Q16514 161 aa8.82□□□□□ -1
USP3-211ENST00000559257 SCARA3Q6AZY7 606 aa8.82□□□□□ -1
USP3-211ENST00000559257 SHC4Q6S5L8 630 aa8.82□□□□□ -1
USP3-211ENST00000559257 C15orf52Q6ZUT6 534 aaKnown RBP8.82□□□□□ -1
USP3-211ENST00000559257 EPM2AIP1Q7L775 607 aaPredicted RBP8.82□□□□□ -1
USP3-211ENST00000559257 UNC45BQ8IWX7 931 aa8.82□□□□□ -1
USP3-211ENST00000559257 TCAIMQ8N3R3 496 aa8.82□□□□□ -1
USP3-211ENST00000559257 FAM109AQ8N4B1 249 aa8.82□□□□□ -1
USP3-211ENST00000559257 TRIB2Q92519 343 aa8.82□□□□□ -1
USP3-211ENST00000559257 ZUFSPQ96AP4 578 aa8.82□□□□□ -1
USP3-211ENST00000559257 SLC47A1Q96FL8 570 aa8.82□□□□□ -1
USP3-211ENST00000559257 TSGA13Q96PP4 275 aa8.82□□□□□ -1
USP3-211ENST00000559257 WACQ9BTA9 647 aa8.82□□□□□ -1
USP3-211ENST00000559257 BTBD2Q9BX70 525 aa8.82□□□□□ -1
USP3-211ENST00000559257 ROPN1BQ9BZX4 212 aaPredicted RBP8.82□□□□□ -1
USP3-211ENST00000559257 NT5C3AQ9H0P0 336 aa8.82□□□□□ -1
USP3-211ENST00000559257 NEUROG2Q9H2A3 272 aa8.82□□□□□ -1
USP3-211ENST00000559257 NHEJ1Q9H9Q4 299 aaPredicted RBP8.82□□□□□ -1
USP3-211ENST00000559257 ROPN1Q9HAT0 212 aaPredicted RBP8.82□□□□□ -1
USP3-211ENST00000559257 THG1LQ9NWX6 298 aaKnown RBP8.82□□□□□ -1
USP3-211ENST00000559257 GPRC5BQ9NZH0 403 aa8.82□□□□□ -1
USP3-211ENST00000559257 SEPT3Q9UH03 358 aa8.82□□□□□ -1
USP3-211ENST00000559257 DPP7Q9UHL4 492 aa8.82□□□□□ -1
USP3-211ENST00000559257 HDAC9Q9UKV0 1011 aa8.82□□□□□ -1
USP3-211ENST00000559257 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
USP3-211ENST00000559257 MYH6P13533 1939 aa8.82□□□□□ -1
USP3-211ENST00000559257 ARHGEF10O15013 1369 aa8.82□□□□□ -1
USP3-211ENST00000559257 TTC26A0AVF1 554 aa8.81□□□□□ -1
USP3-211ENST00000559257 KLRF2D3W0D1 207 aa8.81□□□□□ -1
USP3-211ENST00000559257 GYG2O15488 501 aa8.81□□□□□ -1
USP3-211ENST00000559257 CBX6O95503 412 aa8.81□□□□□ -1
USP3-211ENST00000559257 CCDC130P13994 396 aa8.81□□□□□ -1
USP3-211ENST00000559257 CYP3A5P20815 502 aa8.81□□□□□ -1
USP3-211ENST00000559257 ADCY7P51828 1080 aa8.81□□□□□ -1
USP3-211ENST00000559257 TBX4P57082 545 aa8.81□□□□□ -1
USP3-211ENST00000559257 IFI35P80217 286 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 DAB2P98082 770 aa8.81□□□□□ -1
USP3-211ENST00000559257 UBE4AQ14139 1066 aa8.81□□□□□ -1
USP3-211ENST00000559257 KRT31Q15323 416 aa8.81□□□□□ -1
USP3-211ENST00000559257 SLC15A2Q16348 729 aa8.81□□□□□ -1
USP3-211ENST00000559257 MAPK6Q16659 721 aa8.81□□□□□ -1
USP3-211ENST00000559257 SFT2D3Q587I9 215 aa8.81□□□□□ -1
USP3-211ENST00000559257 RNF19BQ6ZMZ0 732 aa8.81□□□□□ -1
USP3-211ENST00000559257 USP50Q70EL3 339 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 EEPD1Q7L9B9 569 aa8.81□□□□□ -1
USP3-211ENST00000559257 DHDDSQ86SQ9 333 aa8.81□□□□□ -1
USP3-211ENST00000559257 NLRP10Q86W26 655 aa8.81□□□□□ -1
USP3-211ENST00000559257 CDR2LQ86X02 465 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 ADGRG5Q8IZF4 528 aa8.81□□□□□ -1
USP3-211ENST00000559257 SLC4A11Q8NBS3 891 aa8.81□□□□□ -1
USP3-211ENST00000559257 TBC1D15Q8TC07 691 aa8.81□□□□□ -1
USP3-211ENST00000559257 SLC44A1Q8WWI5 657 aa8.81□□□□□ -1
USP3-211ENST00000559257 HDAC11Q96DB2 347 aa8.81□□□□□ -1
USP3-211ENST00000559257 OMA1Q96E52 524 aa8.81□□□□□ -1
USP3-211ENST00000559257 TXNDC15Q96J42 360 aa8.81□□□□□ -1
USP3-211ENST00000559257 WNK4Q96J92 1243 aa8.81□□□□□ -1
USP3-211ENST00000559257 C1QTNF7Q9BXJ2 289 aa8.81□□□□□ -1
USP3-211ENST00000559257 PITPNM3Q9BZ71 974 aa8.81□□□□□ -1
USP3-211ENST00000559257 MMRN2Q9H8L6 949 aa8.81□□□□□ -1
USP3-211ENST00000559257 CABP2Q9NPB3 220 aa8.81□□□□□ -1
USP3-211ENST00000559257 AVENQ9NQS1 362 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 CYP26B1Q9NR63 512 aa8.81□□□□□ -1
USP3-211ENST00000559257 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.81□□□□□ -1
USP3-211ENST00000559257 RAB26Q9ULW5 256 aa8.81□□□□□ -1
USP3-211ENST00000559257 SNX7Q9UNH6 387 aa8.81□□□□□ -1
USP3-211ENST00000559257 TFR2Q9UP52 801 aa8.81□□□□□ -1
USP3-211ENST00000559257 DUSP10Q9Y6W6 482 aa8.81□□□□□ -1
USP3-211ENST00000559257 ALKQ9UM73 1620 aa8.81□□□□□ -1
USP3-211ENST00000559257 TRPC5OSA6NMA1 111 aa8.81□□□□□ -1
USP3-211ENST00000559257 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 CCDC188H7C350 402 aa8.81□□□□□ -1
USP3-211ENST00000559257 MSI1O43347 362 aaKnown RBP8.81□□□□□ -1
USP3-211ENST00000559257 USP1O94782 785 aa8.81□□□□□ -1
USP3-211ENST00000559257 CD4P01730 458 aa8.81□□□□□ -1
USP3-211ENST00000559257 GFAPP14136 432 aa8.81□□□□□ -1
USP3-211ENST00000559257 PDE6AP16499 860 aa8.81□□□□□ -1
USP3-211ENST00000559257 CXCR5P32302 372 aa8.81□□□□□ -1
USP3-211ENST00000559257 MAGEA11P43364 429 aa8.81□□□□□ -1
USP3-211ENST00000559257 TPTEP56180 551 aa8.81□□□□□ -1
USP3-211ENST00000559257 ACTR3P61158 418 aa8.81□□□□□ -1
USP3-211ENST00000559257 BRDTQ58F21 947 aaPredicted RBP8.81□□□□□ -1
USP3-211ENST00000559257 KLHDC7AQ5VTJ3 777 aa8.81□□□□□ -1
USP3-211ENST00000559257 PDXDC2PQ6P474 469 aa8.81□□□□□ -1
USP3-211ENST00000559257 RGS9BPQ6ZS82 235 aa8.81□□□□□ -1
USP3-211ENST00000559257 RAPH1Q70E73 1250 aa8.81□□□□□ -1
USP3-211ENST00000559257 CLYBLQ8N0X4 340 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms