RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZBTB6Q15916 424 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 TLK2Q86UE8 772 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 CNTN3Q9P232 1028 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 HESX1Q9UBX0 185 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 EVPLQ92817 2033 aa11.86□□□□□ -0.51
CLPX-204ENST00000559152 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
CLPX-204ENST00000559152 DCDC2CA8MYV0 355 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 ACSL3O95573 720 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 ABHD2P08910 425 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 PNPLA4P41247 253 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 TXNRD3NBQ6F5E7 133 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 NME8Q8N427 588 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 SLC35B2Q8TB61 432 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 UBA3Q8TBC4 463 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 EPS8L3Q8TE67 593 aaKnown RBP11.85□□□□□ -0.51
CLPX-204ENST00000559152 ZNF473Q8WTR7 871 aaKnown RBP11.85□□□□□ -0.51
CLPX-204ENST00000559152 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 SHOC2Q9UQ13 582 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
CLPX-204ENST00000559152 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 SMIM23A6NLE4 172 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 SGK1O00141 431 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 CST8O60676 142 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 TRUB2O95900 331 aaKnown RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 MIPP30301 263 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 PSEN2P49810 448 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 TFDP2Q14188 446 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 KYNUQ16719 465 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 OLFML2BQ68BL8 750 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 OR6B2Q6IFH4 312 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 ALKAL1Q6UXT8 129 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 EMC1Q8N766 993 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 KAT2BQ92831 832 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 ZNF560Q96MR9 790 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 RBM15Q96T37 977 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLPX-204ENST00000559152 OSMRQ99650 979 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 FAM118BQ9BPY3 351 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 MAK16Q9BXY0 300 aaKnown RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 PHACTR1Q9C0D0 580 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 NINJ2Q9NZG7 142 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 TJP2Q9UDY2 1190 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 HAS3O00219 553 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 ADCY6O43306 1168 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 ZNF865P0CJ78 1059 aaPredicted RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 PDGFRAP16234 1089 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 TMEM62Q0P6H9 643 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 GPS1Q13098 491 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 GOLGA7BQ2TAP0 167 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 FAM47CQ5HY64 1035 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 UHMK1Q8TAS1 419 aaKnown RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 SELENOSQ9BQE4 189 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
CLPX-204ENST00000559152 PPCSQ9HAB8 311 aa11.84□□□□□ -0.51
CLPX-204ENST00000559152 A0A087WUV0 522 aaPredicted RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 C2CD4BA6NLJ0 364 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 APOC4-APOC2K7ER74 178 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 DPYSL4O14531 572 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 PRPSAP2O60256 369 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 CDH16O75309 829 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 APOC2P02655 101 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 IL1R2P27930 398 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 RGS2P41220 211 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 MAGEA4P43358 317 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 SLCO1A2P46721 670 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 ADAM17P78536 824 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 PDK2Q15119 407 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 SMTNL2Q2TAL5 461 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 BOLA3Q53S33 107 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 ARHGAP17Q68EM7 881 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 CENPUQ71F23 418 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 TMEM110Q86TL2 294 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 RFX6Q8HWS3 928 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 ACTL9Q8TC94 416 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 RSAD2Q8WXG1 361 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 SOCS4Q8WXH5 440 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 ACSF2Q96CM8 615 aaPredicted RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 XPO6Q96QU8 1125 aaKnown RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 ADAM7Q9H2U9 754 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 CYLDQ9NQC7 956 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 E5RJQ4 531 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 KPNA6O60684 536 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
CLPX-204ENST00000559152 KIAA0754O94854 1291 aa11.83□□□□□ -0.52
CLPX-204ENST00000559152 KCNE1P15382 129 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms