RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GJA1P17302 382 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 HOXA9P31269 272 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 PGFP49763 221 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 GOLGA7BQ2TAP0 167 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 MGAT5BQ3V5L5 792 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 LEXMQ3ZCV2 418 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 PKDCCQ504Y2 493 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 LIN9Q5TKA1 542 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 GRASPQ7Z6J2 395 aaPredicted RBP11.57□□□□□ -0.56
TPM1-217ENST00000559108 TMEM150AQ86TG1 271 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 SLC47A2Q86VL8 602 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 FAM71AQ8IYT1 594 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 ANKRD20A12PQ8NF67 263 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 SMG7Q92540 1137 aaKnown RBP11.57□□□□□ -0.56
TPM1-217ENST00000559108 TCEAL4Q96EI5 215 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 FUBP3Q96I24 572 aaKnown RBP eCLIP11.57□□□□□ -0.56
TPM1-217ENST00000559108 HEXIM2Q96MH2 286 aaKnown RBP11.57□□□□□ -0.56
TPM1-217ENST00000559108 HNRNPABQ99729 332 aaKnown RBP11.57□□□□□ -0.56
TPM1-217ENST00000559108 IL21Q9HBE4 155 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 ZDHHC7Q9NXF8 308 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 CYTH4Q9UIA0 394 aa11.57□□□□□ -0.56
TPM1-217ENST00000559108 NUP210Q8TEM1 1887 aaPredicted RBP11.57□□□□□ -0.56
TPM1-217ENST00000559108 KIF26AQ9ULI4 1882 aaPredicted RBP11.57□□□□□ -0.56
TPM1-217ENST00000559108 A0A1W2PQC6 194 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 TNFRSF10BO14763 440 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 NCK2O43639 380 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 AP1G2O75843 785 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 POU2F2P09086 479 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 HNRNPA1P09651 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
TPM1-217ENST00000559108 KRT5P13647 590 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 CD19P15391 556 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 HOXB8P17481 243 aaPredicted RBP11.56□□□□□ -0.56
TPM1-217ENST00000559108 MAGEA11P43364 429 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 MFAP3P55082 362 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 UBASH3AP57075 661 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
TPM1-217ENST00000559108 RAPGEF1Q13905 1077 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 PRSS36Q5K4E3 855 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 STXBP5Q5T5C0 1151 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 DENND1BQ6P3S1 775 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 CCDC149Q6ZUS6 474 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 NOP9Q86U38 636 aaKnown RBP11.56□□□□□ -0.56
TPM1-217ENST00000559108 SCN4BQ8IWT1 228 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 ST13P5Q8NFI4 369 aaPredicted RBP11.56□□□□□ -0.56
TPM1-217ENST00000559108 ITFG1Q8TB96 612 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 UBA3Q8TBC4 463 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 C2orf15Q8WU43 125 aaKnown RBP11.56□□□□□ -0.56
TPM1-217ENST00000559108 SLC20A1Q8WUM9 679 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 DDX1Q92499 740 aaKnown RBP11.56□□□□□ -0.56
TPM1-217ENST00000559108 JAKMIP2Q96AA8 810 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 TNIP3Q96KP6 325 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 CSNK1G1Q9HCP0 422 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 THEGQ9P2T0 379 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 HSFX1Q9UBD0 423 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 TSPAN16Q9UKR8 245 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.56□□□□□ -0.56
TPM1-217ENST00000559108 COG5Q9UP83 839 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 NCANO14594 1321 aa11.56□□□□□ -0.56
TPM1-217ENST00000559108 SLC38A8A6NNN8 435 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 GFPT2O94808 682 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 MICAL2O94851 1124 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 GYPCP04921 128 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 PAEPP09466 180 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 VDRP11473 427 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 CHRNB2P17787 502 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 SP100P23497 879 aaPredicted RBP11.55□□□□□ -0.56
TPM1-217ENST00000559108 ELF1P32519 619 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 USP8P40818 1118 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 EPHA5P54756 1037 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 PDE4CQ08493 712 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 GOLGA8FQ08AF8 430 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 GOLGA8DPQ0D2H9 430 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 PLD1Q13393 1074 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
TPM1-217ENST00000559108 SARM1Q6SZW1 724 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 C4orf50Q6ZRC1 276 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 GAREM2Q75VX8 874 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 ENOSF1Q7L5Y1 443 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 DNAJB7Q7Z6W7 309 aaPredicted RBP11.55□□□□□ -0.56
TPM1-217ENST00000559108 WDTC1Q8N5D0 677 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 NEK11Q8NG66 645 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 SCAMP5Q8TAC9 235 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 ING5Q8WYH8 240 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 PSMG2Q969U7 264 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 SMARCD1Q96GM5 515 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 C8orf48Q96LL4 319 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 NECAB3Q96P71 396 aaPredicted RBP11.55□□□□□ -0.56
TPM1-217ENST00000559108 CORO1BQ9BR76 489 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 STK33Q9BYT3 514 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 FAM124BQ9H5Z6 455 aaPredicted RBP11.55□□□□□ -0.56
TPM1-217ENST00000559108 TJP2Q9UDY2 1190 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 NOCTQ9UK39 431 aaKnown RBP11.55□□□□□ -0.56
TPM1-217ENST00000559108 MAFFQ9ULX9 164 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 CLUHO75153 1309 aa11.55□□□□□ -0.56
TPM1-217ENST00000559108 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 LRRC53A6NM62 1247 aa11.54□□□□□ -0.56
TPM1-217ENST00000559108 LRG1P02750 347 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms