RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 OR5B17Q8NGF7 314 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 EDAQ92838 391 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 MYADMQ96S97 322 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 TMEM209Q96SK2 561 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 RTP3Q9BQQ7 232 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 MTMR12Q9C0I1 747 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 SMOC2Q9H3U7 446 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 BRD7Q9NPI1 651 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 AFF4Q9UHB7 1163 aaKnown RBP6.49□□□□□ -1.37
CTDSPL2-204ENST00000558966 ARHGEF37A1IGU5 675 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CYB561D2O14569 222 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 XYLBO75191 536 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 RHOBTB3O94955 611 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CPB1P15086 417 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 PAX3P23760 479 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CYP24A1Q07973 514 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 SNRNP35Q16560 246 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 SV2CQ496J9 727 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 RIPOR1Q6ZS17 1223 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 RTL10Q7L3V2 364 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 GET4Q7L5D6 327 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 USP37Q86T82 979 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 TCEAL8Q8IYN2 117 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 FMR1NBQ8N0W7 255 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 XXYLT1Q8NBI6 393 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 ENGASEQ8NFI3 743 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 OR10T2Q8NGX3 314 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 ACSF2Q96CM8 615 aaPredicted RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 KCTD10Q9H3F6 313 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CYP4F11Q9HBI6 524 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 ATP13A2Q9NQ11 1180 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 INTS13Q9NVM9 706 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 HCFC1R1Q9NWW0 138 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CGNQ9P2M7 1197 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 VTI1BQ9UEU0 232 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 ITGA11Q9UKX5 1188 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 AGAP1Q9UPQ3 857 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 SORCS3Q9UPU3 1222 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 FNDC3AQ9Y2H6 1198 aaKnown RBP6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 INSL5Q9Y5Q6 135 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 CACNA1HO95180 2353 aa6.48□□□□□ -1.37
CTDSPL2-204ENST00000558966 MTMR11A4FU01 709 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 OR6C75A6NL08 312 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PRR33A8MZF0 331 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 KPNA7A9QM74 516 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 NRG2O14511 850 aaPredicted RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PRRG1O14668 218 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 TMEM191BP0C7N4 346 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 GBP2P32456 591 aaPredicted RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ELF1P32519 619 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 SNRPFP62306 86 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ADCY1Q08828 1119 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 GPR17Q13304 367 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 MYBPC2Q14324 1141 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PSMD6Q15008 389 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 WSCD1Q658N2 575 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 HFE2Q6ZVN8 426 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 WDR49Q8IV35 697 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 CSGALNACT2Q8N6G5 542 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 TTC9BQ8N6N2 239 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 LRRC52Q8N7C0 313 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PLEKHO2Q8TD55 490 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 CACTINQ8WUQ7 758 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ASIC4Q96FT7 647 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ANKRD36BP1Q96IX9 119 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ZNF560Q96MR9 790 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PGLYRP2Q96PD5 576 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 CGRRF1Q99675 332 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 OXCT2Q9BYC2 517 aaPredicted RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 KIAA1586Q9HCI6 787 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 DMAC2Q9NW81 257 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 EPS15L1Q9UBC2 864 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 DNMT3BQ9UBC3 853 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 RAPGEFL1Q9UHV5 662 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 YIPF1Q9Y548 306 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PDXKO00764 312 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 LRG1P02750 347 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 THBS1P07996 1170 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 KRT19P08727 400 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 EPB42P16452 691 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PNPLA4P41247 253 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 FAM160A1Q05DH4 1040 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 SIGLEC14Q08ET2 396 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 TWF1Q12792 350 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 BFSP1Q12934 665 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 KCNB1Q14721 858 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 SURF1Q15526 300 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PABPC1LQ4VXU2 614 aaKnown RBP6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 CENPPQ6IPU0 288 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 XKR5Q6UX68 686 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 PDCL2Q8N4E4 241 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ATAD1Q8NBU5 361 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 ITFG1Q8TB96 612 aa6.47□□□□□ -1.37
CTDSPL2-204ENST00000558966 GOLGA5Q8TBA6 731 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms