RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 EEF2P13639 858 aaKnown RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 HMGCS2P54868 508 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 ICA1Q05084 483 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 MLC1Q15049 377 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 TBR1Q16650 682 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 MAN2A1Q16706 1144 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 RRP12Q5JTH9 1297 aaKnown RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 TREML2Q5T2D2 321 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 CASC1Q6TDU7 716 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 MFSD6Q6ZSS7 791 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 RASGRP2Q7LDG7 609 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 CATIPQ7Z7H3 387 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 RALYLQ86SE5 291 aaKnown RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 UNC5BQ8IZJ1 945 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 MIER2Q8N344 545 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 ESR2Q92731 530 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 GFM2Q969S9 779 aaKnown RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 COA7Q96BR5 231 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 RNF41Q9H4P4 317 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 ZNF287Q9HBT7 754 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 ANLNQ9NQW6 1124 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 LIMCH1Q9UPQ0 1083 aa6.93□□□□□ -1.3
LRRC28-209ENST00000558861 CTDP1Q9Y5B0 961 aaPredicted RBP6.93□□□□□ -1.3
LRRC28-209ENST00000558861 RLFQ13129 1914 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 CCL15-CCL14A0A0B4J2E2 113 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 RANBP6O60518 1105 aaKnown RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 TTLL1O95922 423 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 TSPY3P0CV98 308 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 TSPY8P0CW00 308 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 SNHG28P0DPA3 235 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 CETPP11597 493 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 VCAM1P19320 739 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 CTSSP25774 331 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 HOXA7P31268 230 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 SLC16A1P53985 500 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 SESN2P58004 480 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 CCL15Q16663 113 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 ABHD15Q6UXT9 468 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 EPM2AIP1Q7L775 607 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 ANKRD23Q86SG2 305 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 DGKHQ86XP1 1220 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 ZNF444Q8N0Y2 327 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 FBXL16Q8N461 479 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 MSL3Q8N5Y2 521 aaKnown RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 GMCL1P1Q8NEA9 526 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 OR2I1PQ8NGU4 316 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 OR14K1Q8NGZ2 314 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 RIN2Q8WYP3 895 aaPredicted RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 UIMC1Q96RL1 719 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 ADI1Q9BV57 179 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 AGXT2Q9BYV1 514 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 OR10A2Q9H208 303 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 R3HDMLQ9H3Y0 253 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 VCPKMTQ9H867 229 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 ZCCHC17Q9NP64 241 aaKnown RBP6.92□□□□□ -1.3
LRRC28-209ENST00000558861 INTUQ9ULD6 942 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 AGTPBP1Q9UPW5 1226 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 SLC45A1Q9Y2W3 748 aa6.92□□□□□ -1.3
LRRC28-209ENST00000558861 MKI67P46013 3256 aaKnown RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 MROH6A6NGR9 719 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 TSPY2A6NKD2 308 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 MPHOSPH10O00566 681 aaKnown RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 SH2B2O14492 632 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 NDUFB10O96000 172 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 LTA4HP09960 611 aaKnown RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 LPOP22079 712 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 EDNRBP24530 442 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 CYP2C19P33261 490 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 FXR1P51114 621 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 INHBEP58166 350 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 MEF2AQ02078 507 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 SREBF2Q12772 1141 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 TROAPQ12815 778 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 ZNF267Q14586 743 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 ACAP1Q15027 740 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 SLC35G1Q2M3R5 365 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 CXorf57Q6NSI4 855 aaKnown RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 KBTBD2Q8IY47 623 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 LRRC56Q8IYG6 542 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 ZDHHC14Q8IZN3 488 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 LPAR1Q92633 364 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 GCDHQ92947 438 aaPredicted RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 CLIP3Q96DZ5 547 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 TTC14Q96N46 770 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 TMEM47Q9BQJ4 181 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 GTPBP4Q9BZE4 634 aaKnown RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 TM6SF1Q9BZW5 370 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 KRT23Q9C075 422 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 LY9Q9HBG7 655 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 AS3MTQ9HBK9 375 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
LRRC28-209ENST00000558861 RNF186Q9NXI6 227 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 CLIP2Q9UDT6 1046 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 IPPQ9Y573 584 aa6.91□□□□□ -1.3
LRRC28-209ENST00000558861 WDR19Q8NEZ3 1342 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms