RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 ARID3AQ99856 593 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 NIF3L1Q9GZT8 377 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
LINC01220-201ENST00000558575 NDST4Q9H3R1 872 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 DPEP3Q9H4B8 488 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 PARD6AQ9NPB6 346 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 MAGEC2Q9UBF1 373 aaPredicted RBP16.55■□□□□ 0.24
LINC01220-201ENST00000558575 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
LINC01220-201ENST00000558575 SETXQ7Z333 2677 aaKnown RBP16.55■□□□□ 0.24
LINC01220-201ENST00000558575 TSC2P49815 1807 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 ZZEF1O43149 2961 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 MTMR11A4FU01 709 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 LRRC10BA6NIK2 292 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 PRR5-ARHGAP8B1AHC4 643 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 ZMYND10O75800 440 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 HOXB3P14651 431 aaPredicted RBP16.54■□□□□ 0.24
LINC01220-201ENST00000558575 ARHGAP8P85298 464 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 DUSP4Q13115 394 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 KRT31Q15323 416 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 SLC39A12Q504Y0 691 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 TCEAL8Q8IYN2 117 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 TTC9BQ8N6N2 239 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 ZNF707Q96C28 371 aaPredicted RBP16.54■□□□□ 0.24
LINC01220-201ENST00000558575 FAXDC2Q96IV6 333 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 MYADMQ96S97 322 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 CRACR2AQ9BSW2 395 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 CYP3A43Q9HB55 503 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 CBX8Q9HC52 389 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 TAB2Q9NYJ8 693 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 LIMA1Q9UHB6 759 aaKnown RBP16.54■□□□□ 0.24
LINC01220-201ENST00000558575 SLC27A5Q9Y2P5 690 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 IGF2RP11717 2491 aa16.54■□□□□ 0.24
LINC01220-201ENST00000558575 CCDC195A0A1B0GUA6 201 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 C8AP07357 584 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 ATP1A3P13637 1013 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 P4HA1P13674 534 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 SLC9A1P19634 815 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 PCSK1P29120 753 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
LINC01220-201ENST00000558575 PSMC1P62191 440 aaKnown RBP16.53■□□□□ 0.24
LINC01220-201ENST00000558575 APBA1Q02410 837 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 INCA1Q0VD86 236 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 KCNMA1Q12791 1236 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 ZNF528Q3MIS6 628 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 WDR44Q5JSH3 913 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 ARHGEF19Q8IW93 802 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 UBR7Q8N806 425 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 CMASQ8NFW8 434 aaPredicted RBP16.53■□□□□ 0.24
LINC01220-201ENST00000558575 SLC7A14Q8TBB6 771 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 KAT5Q92993 513 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 SYT15Q9BQS2 421 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 INTS2Q9H0H0 1204 aaKnown RBP16.53■□□□□ 0.24
LINC01220-201ENST00000558575 SNX25Q9H3E2 840 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 CYP4F11Q9HBI6 524 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 CDH9Q9ULB4 789 aa16.53■□□□□ 0.24
LINC01220-201ENST00000558575 SMG5Q9UPR3 1016 aaKnown RBP16.53■□□□□ 0.24
LINC01220-201ENST00000558575 SPDYE4A6NLX3 237 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 A8MXQ7 604 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 CLSTN1O94985 981 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
LINC01220-201ENST00000558575 PTPN1P18031 435 aaKnown RBP16.52■□□□□ 0.24
LINC01220-201ENST00000558575 PON1P27169 355 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 NDST1P52848 882 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 TSPY1Q01534 308 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 ORC1Q13415 861 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 CUL2Q13617 745 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 PPM1JQ5JR12 505 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 DCP1BQ8IZD4 617 aaKnown RBP16.52■□□□□ 0.24
LINC01220-201ENST00000558575 CRYBG2Q8N1P7 616 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 CCDC150Q8NCX0 1101 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 PRKD2Q9BZL6 878 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 ELOVL4Q9GZR5 314 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 VPS16Q9H269 839 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 SIX2Q9NPC8 291 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 EPS15L1Q9UBC2 864 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 MAFFQ9ULX9 164 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 USP18Q9UMW8 372 aa16.52■□□□□ 0.24
LINC01220-201ENST00000558575 CLUHO75153 1309 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
LINC01220-201ENST00000558575 SMTNL1A8MU46 457 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 CILPO75339 1184 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 SOAT2O75908 522 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 CD58P19256 250 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 ACO1P21399 889 aaKnown RBP16.51■□□□□ 0.23
LINC01220-201ENST00000558575 ELF1P32519 619 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 COPB1P53618 953 aaKnown RBP16.51■□□□□ 0.23
LINC01220-201ENST00000558575 PAQR9Q6ZVX9 377 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 RTL10Q7L3V2 364 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 ACOT1Q86TX2 421 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 LUZP1Q86V48 1076 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 UNC93AQ86WB7 457 aa16.51■□□□□ 0.23
LINC01220-201ENST00000558575 ST13P5Q8NFI4 369 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms