RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 RBM47A0AV96 593 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 ARHGAP42A6NI28 874 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L15C9J2P7 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L13C9JLJ4 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L11C9JVI0 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L18D6R9N7 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L22D6RA61 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L17D6RBQ6 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L19D6RCP7 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L20D6RJB6 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 E7ESA3 106 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 GOLGA8RI6L899 631 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 PDE5AO76074 875 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 SLITRK3O94933 977 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 SLC5A2P31639 672 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 NOP14P78316 857 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L24Q0WX57 530 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 EFTUD2Q15029 972 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 PDCD4Q53EL6 469 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 C1orf220Q5T0J3 134 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 LRRC47Q8N1G4 583 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 MARCH10Q8NA82 808 aaPredicted RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 FAM118BQ9BPY3 351 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 C12orf65Q9H3J6 166 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 ACP6Q9NPH0 428 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 ARHGEF38Q9NXL2 777 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 DNPEPQ9ULA0 475 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 IRS2Q9Y4H2 1338 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 E5RJQ4 531 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ITGAVP06756 1048 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 UNGP13051 313 aaPredicted RBP11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ZNF24P17028 368 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 PMLP29590 882 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 GJA8P48165 433 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 GCLMP48507 274 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 MXI1P50539 228 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 CYP4A11Q02928 519 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 GSTM4Q03013 218 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ALCAMQ13740 583 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 KBTBD12Q3ZCT8 623 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
PCAT29-201ENST00000558411 RCOR2Q8IZ40 523 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 GLIS1Q8NBF1 620 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 CATSPER1Q8NEC5 780 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ACTRT2Q8TDY3 377 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.53
PCAT29-201ENST00000558411 VPS50Q96JG6 964 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 RTFDC1Q9BY42 306 aaPredicted RBP11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 GRIP2Q9C0E4 1043 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 TMEM117Q9H0C3 514 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 STN1Q9H668 368 aaKnown RBP11.71□□□□□ -0.53
PCAT29-201ENST00000558411 PLGRKTQ9HBL7 147 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ITGA11Q9UKX5 1188 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 EXOC7Q9UPT5 735 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.53
PCAT29-201ENST00000558411 ASTN2O75129 1339 aaPredicted RBP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 SF3B1O75533 1304 aaKnown RBP eCLIP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 PRR5-ARHGAP8B1AHC4 643 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 DNAJA2O60884 412 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 KLHL2O95198 593 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ZSCAN5DPP0CG00 497 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 RAG1P15918 1043 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 PCSK6P29122 969 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 SSTR1P30872 391 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 CIITAP33076 1130 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 HSPA13P48723 471 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ERFP50548 548 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 MTTPP55157 894 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 COG7P83436 770 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ARHGAP8P85298 464 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ZNF200P98182 395 aaPredicted RBP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 WASHC5Q12768 1159 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 PACS1Q6VY07 963 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ANKMY2Q8IV38 441 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 PPIL6Q8IXY8 311 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 PPM1KQ8N3J5 372 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 RDH13Q8NBN7 331 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 NKD2Q969F2 451 aaPredicted RBP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 DCUN1D1Q96GG9 259 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 KLF6Q99612 283 aaPredicted RBP11.71□□□□□ -0.54
PCAT29-201ENST00000558411 HSD17B14Q9BPX1 270 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 MAF1Q9H063 256 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 BRD8Q9H0E9 1235 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 TMEM206Q9H813 350 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ZNF652Q9Y2D9 606 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 SNCAIPQ9Y6H5 919 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 CEPT1Q9Y6K0 416 aa11.71□□□□□ -0.54
PCAT29-201ENST00000558411 ZHX2Q9Y6X8 837 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms