RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ISCUQ9H1K1 167 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 USP6P35125 1406 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 A0A1B0GTH6 734 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 TSPAN3O60637 253 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 AP1G2O75843 785 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 COMTP21964 271 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 POU1F1P28069 291 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ALDH1A3P47895 512 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 PRUNE1Q86TP1 453 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ZC3H11AO75152 810 aaKnown RBP eCLIP14.47□□□□□ -0.09
SPG11-210ENST00000558319 FOSL2P15408 326 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 CASP4P49662 377 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 NUP107P57740 925 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 EMC2Q15006 297 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 PGS1Q32NB8 556 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 RBBP8NLQ8NC74 664 aaPredicted RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 GPATCH2LQ9NWQ4 482 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ZNF839A8K0R7 811 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 SERPINB9P50453 376 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 COX10Q12887 443 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 TRIM72Q6ZMU5 477 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 MTDHQ86UE4 582 aaKnown RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 TC2NQ8N9U0 490 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ZNF560Q96MR9 790 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ZMYND8Q9ULU4 1186 aaPredicted RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 TRIM43BA6NCK2 446 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 TAF4O00268 1085 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 CYP7B1O75881 506 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 GLRBP48167 497 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 NPEPPSP55786 919 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 C12orf60Q5U649 245 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 KHDRBS2Q5VWX1 349 aaKnown RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 ERAP2Q6P179 960 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 ASAP3Q8TDY4 903 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 USP13Q92995 863 aaPredicted RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 TNIP3Q96KP6 325 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 SCAMP3O14828 347 aaKnown RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 LRG1P02750 347 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 APOA4P06727 396 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 SOX10P56693 466 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 GEMIN4P57678 1058 aaKnown RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 TAF5Q15542 800 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 FRMD5Q7Z6J6 570 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 PRCCQ92733 491 aaPredicted RBP14.47□□□□□ -0.09
SPG11-210ENST00000558319 APOL2Q9BQE5 337 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 KCTD10Q9H3F6 313 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 GRID1Q9ULK0 1009 aa14.47□□□□□ -0.09
SPG11-210ENST00000558319 NUP62P37198 522 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 NCALDP61601 193 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 CSTF3Q12996 717 aaKnown RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 NR1I3Q14994 352 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 CDC42EP5Q6NZY7 148 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 KDM7AQ6ZMT4 941 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 AHI1Q8N157 1196 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 SH3TC2Q8TF17 1288 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 CYP4F12Q9HCS2 524 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 PPIEQ9UNP9 301 aaKnown RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 CDY2AQ9Y6F7 541 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 CDY1Q9Y6F8 540 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 ASB14A6NK59 587 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 TBC1D12O60347 775 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 KRT16P08779 473 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 GMPSP49915 693 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 SNRNP35Q16560 246 aaKnown RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 SNX30Q5VWJ9 437 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 MB21D2Q8IYB1 491 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 TBC1D16Q8TBP0 767 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 LRRC39Q96DD0 335 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 FAM20AQ96MK3 541 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 FHDC1Q9C0D6 1143 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 OSGEPL1Q9H4B0 414 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 KRT84Q9NSB2 600 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 FHOD1Q9Y613 1164 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 PCNAP12004 261 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 FOXO4P98177 505 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 TAP1Q03518 808 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 SDE2Q6IQ49 451 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 TRMT2AQ8IZ69 625 aaKnown RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 USP38Q8NB14 1042 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 ERP44Q9BS26 406 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 SAC3D1A6NKF1 404 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 MEI4A8MW99 385 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 ZNF862O60290 1169 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 UBOX5O94941 541 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 FEN1P39748 380 aaKnown RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 ITIH4Q14624 930 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 KCNT1Q5JUK3 1230 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 ATF7IP2Q5U623 682 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 GUF1Q8N442 669 aaKnown RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 ST13P5Q8NFI4 369 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 PPP1R14AQ96A00 147 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 CEP41Q9BYV8 373 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 ROPN1BQ9BZX4 212 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 ROPN1Q9HAT0 212 aaPredicted RBP14.46□□□□□ -0.09
SPG11-210ENST00000558319 GPRC5CQ9NQ84 441 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 UBP1Q9NZI7 540 aa14.46□□□□□ -0.09
SPG11-210ENST00000558319 STK36Q9NRP7 1315 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms