RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 APOA5Q6Q788 366 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 MAVSQ7Z434 540 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ZNF804AQ7Z570 1209 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 SRGAP1Q7Z6B7 1085 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 DTX2Q86UW9 622 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ZNF575Q86XF7 245 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 OSCP1Q8WVF1 389 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 XAGE5Q8WWM1 108 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 LRTOMTQ8WZ04 291 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 GLG1Q92896 1179 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 R3HDM4Q96D70 268 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ZNF518BQ9C0D4 1074 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 LRRC27Q9C0I9 530 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 CXorf36Q9H7Y0 433 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 ALG13Q9NP73 1137 aaKnown RBP4.17□□□□□ -1.74
SPG11-206ENST00000558093 TRMT13Q9NUP7 481 aaKnown RBP4.17□□□□□ -1.74
SPG11-206ENST00000558093 ARPP21Q9UBL0 812 aaPredicted RBP4.17□□□□□ -1.74
SPG11-206ENST00000558093 PADI4Q9UM07 663 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 SSX2IPQ9Y2D8 614 aa4.17□□□□□ -1.74
SPG11-206ENST00000558093 LRRC3CA6NJW4 275 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 TMEM233B4DJY2 109 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 RASSF9O75901 435 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 ONECUT2O95948 504 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 IL6RP08887 468 aaPredicted RBP4.16□□□□□ -1.74
SPG11-206ENST00000558093 ENGP17813 658 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 CYP2C18P33260 490 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 LIPAP38571 399 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 TPTEP56180 551 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 FAM193AP78312 1265 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 GRM3Q14832 879 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 POLD3Q15054 466 aaPredicted RBP4.16□□□□□ -1.74
SPG11-206ENST00000558093 DCAF12L1Q5VU92 463 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 ANKRD16Q6P6B7 361 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 SLC29A4Q7RTT9 530 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 C14orf80Q86SX3 495 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 ZNF280BQ86YH2 543 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 FMNL3Q8IVF7 1028 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 SPARTQ8N0X7 666 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 FAM98AQ8NCA5 519 aaKnown RBP4.16□□□□□ -1.74
SPG11-206ENST00000558093 FAM156AQ8NDB6 213 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 BPIFB1Q8TDL5 484 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 PPP1R9BQ96SB3 815 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 TIMP4Q99727 224 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 MESP1Q9BRJ9 268 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 STK31Q9BXU1 1019 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 DPH1Q9BZG8 443 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 A1CFQ9NQ94 594 aaKnown RBP4.16□□□□□ -1.74
SPG11-206ENST00000558093 ADARB2Q9NS39 739 aaKnown RBP4.16□□□□□ -1.74
SPG11-206ENST00000558093 AFF4Q9UHB7 1163 aaKnown RBP4.16□□□□□ -1.74
SPG11-206ENST00000558093 HDAC9Q9UKV0 1011 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 L1RE1Q9UN81 338 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 SH2B3Q9UQQ2 575 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 USP19O94966 1318 aa4.16□□□□□ -1.74
SPG11-206ENST00000558093 A6NNZ2 444 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 ISM1B1AKI9 464 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 MYO1FO00160 1098 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 GOLIM4O00461 696 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 TPP1O14773 563 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 FRS3O43559 492 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 PROP1O75360 226 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 MAP4K4O95819 1239 aaPredicted RBP4.15□□□□□ -1.75
SPG11-206ENST00000558093 HNRNPCP07910 306 aaKnown RBP eCLIP4.15□□□□□ -1.75
SPG11-206ENST00000558093 NPSP0C0P6 89 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 WT1P19544 449 aaPredicted RBP4.15□□□□□ -1.75
SPG11-206ENST00000558093 KLRC1P26715 233 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 PEX2P28328 305 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 ADORA2AP29274 412 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 MTHFSP49914 203 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 EEFSECP57772 596 aaKnown RBP4.15□□□□□ -1.75
SPG11-206ENST00000558093 SP2Q02086 613 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 GBX1Q14549 363 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 ZIK1Q3SY52 487 aaPredicted RBP4.15□□□□□ -1.75
SPG11-206ENST00000558093 CACHD1Q5VU97 1274 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 SUMO4Q6EEV6 95 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 CEP85Q6P2H3 762 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 GAS2L3Q86XJ1 694 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 FANCBQ8NB91 859 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 TTC8Q8TAM2 541 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 ANKS1AQ92625 1134 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 SPSB4Q96A44 273 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 DPCDQ9BVM2 203 aaPredicted RBP4.15□□□□□ -1.75
SPG11-206ENST00000558093 SMURF2Q9HAU4 748 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 ZNF287Q9HBT7 754 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 SERTAD4Q9NUC0 356 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 SH3BP4Q9P0V3 963 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 CPNE7Q9UBL6 633 aa4.15□□□□□ -1.75
SPG11-206ENST00000558093 A1L4Q6 167 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 TRIM43BA6NCK2 446 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 MBD3L4A6NDZ8 208 aaPredicted RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 MBD3L3A6NE82 208 aaPredicted RBP4.14□□□□□ -1.75
SPG11-206ENST00000558093 H0YIZ8 118 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 RGS10O43665 173 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 SRGAP2O75044 1071 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 C1QL1O75973 258 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 RASAL1O95294 804 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 ZBED1O96006 694 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 CSF1RP07333 972 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 FAM163BP0C2L3 166 aa4.14□□□□□ -1.75
SPG11-206ENST00000558093 KCNA3P22001 575 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms