RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FTLP02792 175 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 ADH1AP07327 375 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 PLEKP08567 350 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 FAM228BP0C875 321 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 UNGP13051 313 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 NPR3P17342 541 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 CHRNB2P17787 502 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 ELF1P32519 619 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 NDUFV1P49821 464 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 VAV2P52735 878 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 NOMO3P69849 1222 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 GPC5P78333 572 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 CYP27A1Q02318 531 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 GOLGA7BQ2TAP0 167 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 PPP1R26Q5T8A7 1209 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 KIAA0319Q5VV43 1072 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 RAD9BQ6WBX8 426 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 RHOT2Q8IXI1 618 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 SLC20A1Q8WUM9 679 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 TFAP2BQ92481 460 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 TMEM209Q96SK2 561 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 TRIM62Q9BVG3 475 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 ZBP1Q9H171 429 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 KCNF1Q9H3M0 494 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 RXFP1Q9HBX9 757 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 TLR9Q9NR96 1032 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
TPM1-209ENST00000558072 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 SCINQ9Y6U3 715 aa13.12□□□□□ -0.31
TPM1-209ENST00000558072 A0A0A6YYK5 440 aaPredicted RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 FAM170AA1A519 330 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 BTNL10A8MVZ5 291 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 C2CD2LO14523 706 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 TMEM253P0C7T8 217 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 ACAT1P24752 427 aaKnown RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 IRS1P35568 1242 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 GPD2P43304 727 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 PSMC1P62191 440 aaKnown RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 PLD1Q13393 1074 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 RAB33AQ14088 237 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 PTPROQ16827 1216 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 ARHGAP29Q52LW3 1261 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 RTP2Q5QGT7 225 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 RNF10Q8N5U6 811 aaKnown RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 KCTD13Q8WZ19 329 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 RTP3Q9BQQ7 232 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
TPM1-209ENST00000558072 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 CRTAC1Q9NQ79 661 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 FAM49BQ9NUQ9 324 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 SPTLC3Q9NUV7 552 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 ADAM22Q9P0K1 906 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 PPP2R2CQ9Y2T4 447 aa13.11□□□□□ -0.31
TPM1-209ENST00000558072 TMEM265A0A087WTH1 108 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 MYBPHLA2RUH7 354 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 H3BNC9 293 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 PJA2O43164 708 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 AP1G2O75843 785 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 FBXO21O94952 628 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 CXCL14O95715 111 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 MMP8P22894 467 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 ADORA2BP29275 332 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 CA8P35219 290 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 SCNN1AP37088 669 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 GSCP56915 257 aaPredicted RBP13.1□□□□□ -0.31
TPM1-209ENST00000558072 ZNF268Q14587 947 aaPredicted RBP13.1□□□□□ -0.31
TPM1-209ENST00000558072 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 FAM35AQ86V20 835 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 FUKQ8N0W3 1084 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 OR10T2Q8NGX3 314 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 KIAA1524Q8TCG1 905 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 MICAL1Q8TDZ2 1067 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 SLC35F5Q8WV83 523 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 MYLPFQ96A32 169 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 C18orf8Q96DM3 657 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 PPP1R13BQ96KQ4 1090 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
TPM1-209ENST00000558072 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms