RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 COL19A1Q14993 1142 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 CNGA2Q16280 664 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 DDR2Q16832 855 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 RARS2Q5T160 578 aaKnown RBP22.54■■□□□ 1.2
CASC4-204ENST00000557945 RTL10Q7L3V2 364 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 ZSWIM1Q9BR11 485 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 GRPEL1Q9HAV7 217 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 ZDHHC7Q9NXF8 308 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 CLEC1BQ9P126 229 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 TSPAN16Q9UKR8 245 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 MYO6Q9UM54 1294 aa22.54■■□□□ 1.2
CASC4-204ENST00000557945 CCDC195A0A1B0GUA6 201 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 ADCY5O95622 1261 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 GYPCP04921 128 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 TPM1P09493 284 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 ANXA13P27216 316 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 EPHB3P54753 998 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 PLD1Q13393 1074 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 TRIM14Q14142 442 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 STILQ15468 1287 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 SDHAF4Q5VUM1 108 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 LCLAT1Q6UWP7 414 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 TMC5Q6UXY8 1006 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 GPR152Q8TDT2 470 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 ZNF606Q8WXB4 792 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 DMAP1Q9NPF5 467 aaPredicted RBP22.53■■□□□ 1.2
CASC4-204ENST00000557945 CAPN11Q9UMQ6 739 aa22.53■■□□□ 1.2
CASC4-204ENST00000557945 LUC7L2Q9Y383 392 aaKnown RBP22.53■■□□□ 1.2
CASC4-204ENST00000557945 F8VP50 259 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 TRIM66O15016 1216 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 HNRNPA1P09651 372 aaKnown RBP eCLIP22.52■■□□□ 1.2
CASC4-204ENST00000557945 HOXB8P17481 243 aaPredicted RBP22.52■■□□□ 1.2
CASC4-204ENST00000557945 HOXA9P31269 272 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 CASP14P31944 242 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 LTBRP36941 435 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 PDE6CP51160 858 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 MAP3K7CLP57077 242 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 ZBED6P86452 979 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 VEPH1Q14D04 833 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 CLUL1Q15846 466 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 SFMBT2Q5VUG0 894 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 SYCE2Q6PIF2 218 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 FMNL3Q8IVF7 1028 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 ELMOD1Q8N336 334 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 ANKRD52Q8NB46 1076 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 UBA3Q8TBC4 463 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 GIPC2Q8TF65 315 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 UBE2ZQ9H832 354 aaPredicted RBP22.52■■□□□ 1.2
CASC4-204ENST00000557945 TMEM30AQ9NV96 361 aa22.52■■□□□ 1.2
CASC4-204ENST00000557945 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.52■■□□□ 1.2
CASC4-204ENST00000557945 MTCL1Q9Y4B5 1905 aaKnown RBP22.52■■□□□ 1.2
CASC4-204ENST00000557945 M0QYV0 167 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 XYLBO75191 536 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 MICAL2O94851 1124 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 CCDC172P0C7W6 258 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 CYP11B1P15538 503 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 FERP16591 822 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 NPR3P17342 541 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 ATF6P18850 670 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 KCNA5P22460 613 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 SLC8A3P57103 927 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 ASIC2Q16515 512 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 TAF3Q5VWG9 929 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 DRC7Q8IY82 874 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 HLA-CQ95604 372 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 C8orf48Q96LL4 319 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 KCNK16Q96T55 309 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 SMOQ99835 787 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 DUSP16Q9BY84 665 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 PRKD2Q9BZL6 878 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 PDCL3Q9H2J4 239 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 PIDD1Q9HB75 910 aa22.51■■□□□ 1.19
CASC4-204ENST00000557945 H3BQ06 376 aaPredicted RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 BEST1O76090 585 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 KRT9P35527 623 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 BCAT1P54687 386 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 TAF12Q16514 161 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 CLEC20AQ6ZU45 233 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 NOP9Q86U38 636 aaKnown RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 TTC30AQ86WT1 665 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 CMASQ8NFW8 434 aaPredicted RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 SMG7Q92540 1137 aaKnown RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 ZNF512Q96ME7 567 aaPredicted RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 NUCKS1Q9H1E3 243 aaKnown RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 PDE4CQ08493 712 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 DENND1BQ6P3S1 775 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 STKLD1Q8NE28 680 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 ZMIZ2Q8NF64 920 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 ZNF707Q96C28 371 aaPredicted RBP22.5■■□□□ 1.19
CASC4-204ENST00000557945 CD207Q9UJ71 328 aa22.5■■□□□ 1.19
CASC4-204ENST00000557945 CFHP08603 1231 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 BST2Q10589 180 aaKnown RBP22.49■■□□□ 1.19
CASC4-204ENST00000557945 CES5AQ6NT32 575 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 ITIH5Q86UX2 942 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 PASD1Q8IV76 773 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 FEZF2Q8TBJ5 459 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 EPS8L1Q8TE68 723 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 SECISBP2LQ93073 1101 aaKnown RBP22.49■■□□□ 1.19
CASC4-204ENST00000557945 MSLNLQ96KJ4 702 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms