RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PDZD4Q76G19 769 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 PSMG2Q969U7 264 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 CYFIP2Q96F07 1278 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 MYADMQ96S97 322 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 TSPY26PQ9H489 355 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 ZNF334Q9HCZ1 680 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 SIX2Q9NPC8 291 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 PRKAG3Q9UGI9 489 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 MAGED2Q9UNF1 606 aaPredicted RBP15.23■□□□□ 0.03
USP3-205ENST00000557884 ASB3Q9Y575 518 aa15.23■□□□□ 0.03
USP3-205ENST00000557884 SLC38A8A6NNN8 435 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 RNF225M0QZC1 329 aaPredicted RBP15.22■□□□□ 0.03
USP3-205ENST00000557884 KRT5P13647 590 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 CD19P15391 556 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 GJA1P17302 382 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 CEBPBP17676 345 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 ANXA13P27216 316 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 KLK7P49862 253 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 FKBP15Q5T1M5 1219 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 CYP4A22Q5TCH4 519 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 TMC8Q8IU68 726 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 TDRD5Q8NAT2 981 aaKnown RBP15.22■□□□□ 0.03
USP3-205ENST00000557884 RBBP8NLQ8NC74 664 aaPredicted RBP15.22■□□□□ 0.03
USP3-205ENST00000557884 SMARCD1Q96GM5 515 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 NR2E1Q9Y466 385 aa15.22■□□□□ 0.03
USP3-205ENST00000557884 GOLGA6L19H0YKK7 550 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 TRIM66O15016 1216 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 CAVIN2O95810 425 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 FAM200BP0CF97 657 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 USP8P40818 1118 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 MFAP3P55082 362 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 TPM4P67936 248 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 UBXN1Q04323 297 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 SYCP1Q15431 976 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 PRSS36Q5K4E3 855 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 PPP1R26Q5T8A7 1209 aaPredicted RBP15.21■□□□□ 0.03
USP3-205ENST00000557884 ENOSF1Q7L5Y1 443 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 OTOP3Q7RTS5 596 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 ST13P5Q8NFI4 369 aaPredicted RBP15.21■□□□□ 0.03
USP3-205ENST00000557884 JAKMIP2Q96AA8 810 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 C8orf48Q96LL4 319 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 PCMTD1Q96MG8 357 aaPredicted RBP15.21■□□□□ 0.03
USP3-205ENST00000557884 KCNK16Q96T55 309 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 HNRNPABQ99729 332 aaKnown RBP15.21■□□□□ 0.03
USP3-205ENST00000557884 SMOQ99835 787 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 LRRC3Q9BY71 257 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 FAM124BQ9H5Z6 455 aaPredicted RBP15.21■□□□□ 0.03
USP3-205ENST00000557884 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 DMAP1Q9NPF5 467 aaPredicted RBP15.21■□□□□ 0.03
USP3-205ENST00000557884 DNAJC12Q9UKB3 198 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 FHOD1Q9Y613 1164 aa15.21■□□□□ 0.03
USP3-205ENST00000557884 TTC28Q96AY4 2481 aa15.21■□□□□ 0.02
USP3-205ENST00000557884 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 C19orf67A6NJJ6 358 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 LOC730098B7Z3J9 87 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 MOSPD3O75425 235 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 BEST1O76090 585 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 CSH1P0DML2 217 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 CSH2P0DML3 217 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 HMGA1P17096 107 aaKnown RBP15.2■□□□□ 0.02
USP3-205ENST00000557884 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
USP3-205ENST00000557884 GABRR2P28476 465 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 EPHA5P54756 1037 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 MAP3K7CLP57077 242 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 USP46P62068 366 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
USP3-205ENST00000557884 TEAD2Q15562 447 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 PTPN21Q16825 1174 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 SGO2Q562F6 1265 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 DPY19L2P1Q6NXN4 242 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 GJD3Q8N144 294 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 LEMD2Q8NC56 503 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 RNF214Q8ND24 703 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 SHKBP1Q8TBC3 707 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 FGF13Q92913 245 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
USP3-205ENST00000557884 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
USP3-205ENST00000557884 FAM207AQ9NSI2 230 aaPredicted RBP15.2■□□□□ 0.02
USP3-205ENST00000557884 CDH7Q9ULB5 785 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
USP3-205ENST00000557884 ZNF197O14709 1029 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 TEX33O43247 280 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 NOL4O94818 638 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 PNMA6AP0CW24 399 aaPredicted RBP15.19■□□□□ 0.02
USP3-205ENST00000557884 ZNF132P52740 706 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 CYP4F8P98187 520 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 ARHGAP17Q68EM7 881 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 POTEHQ6S545 545 aa15.19■□□□□ 0.02
USP3-205ENST00000557884 CLEC20AQ6ZU45 233 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms