RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 NOL4O94818 638 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 AVPR2P30518 371 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 RAP1GAPP47736 663 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 GPR15P49685 360 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 NLRP12P59046 1061 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 SDHAF4Q5VUM1 108 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 ARID3BQ8IVW6 561 aaPredicted RBP14.69□□□□□ -0.06
VPS33B-206ENST00000557358 MFSD6LQ8IWD5 586 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 ZC3H3Q8IXZ2 948 aaKnown RBP14.69□□□□□ -0.06
VPS33B-206ENST00000557358 MLKLQ8NB16 471 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 ST13P5Q8NFI4 369 aaPredicted RBP14.69□□□□□ -0.06
VPS33B-206ENST00000557358 CSGALNACT1Q8TDX6 532 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 DNASE1L2Q92874 299 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 C8orf48Q96LL4 319 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 MYRFLQ96LU7 910 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 SLITRK1Q96PX8 696 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 RPP25Q9BUL9 199 aaKnown RBP14.69□□□□□ -0.06
VPS33B-206ENST00000557358 NT5C1AQ9BXI3 368 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 NUP62CLQ9H1M0 184 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 TRPM5Q9NZQ8 1165 aa14.69□□□□□ -0.06
VPS33B-206ENST00000557358 TRIOO75962 3097 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 TRAV19A0A0A6YYK7 116 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 HEPACAM2A8MVW5 462 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 F8VP50 259 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 NCAM2O15394 837 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 MOSPD3O75425 235 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 RTN3O95197 1032 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 WEE1P30291 646 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 GDI1P31150 447 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 ASPAP45381 313 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 NDST1P52848 882 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 PMS1P54277 932 aaKnown RBP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 SLC8A3P57103 927 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 CYP4F8P98187 520 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 MLF2Q15773 248 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 SLC44A4Q53GD3 710 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 C1orf220Q5T0J3 134 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 SPOPLQ6IQ16 392 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 CC2D1AQ6P1N0 951 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 C1orf228Q6PIY5 440 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 ACOT1Q86TX2 421 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 CELF5Q8N6W0 485 aaKnown RBP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 MAB21L3Q8N8X9 362 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 ZSWIM3Q96MP5 696 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 BCO2Q9BYV7 579 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 DPEP3Q9H4B8 488 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 KIF9Q9HAQ2 790 aa14.68□□□□□ -0.06
VPS33B-206ENST00000557358 DMAP1Q9NPF5 467 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS33B-206ENST00000557358 PPP1R3GB7ZBB8 358 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 MAN2B1O00754 1011 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 F11P03951 625 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
VPS33B-206ENST00000557358 HMGA1P17096 107 aaKnown RBP14.67□□□□□ -0.06
VPS33B-206ENST00000557358 PFKLP17858 780 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 CD58P19256 250 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 TBXAS1P24557 533 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-206ENST00000557358 VIPR2P41587 438 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 STX17P56962 302 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 GRM2Q14416 872 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 ARHGAP29Q52LW3 1261 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 PHLDB3Q6NSJ2 640 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 TTI2Q6NXR4 508 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 MON1AQ86VX9 555 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 CREBRFQ8IUR6 639 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 CMTM8Q8IZV2 173 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 NUP93Q8N1F7 819 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 CRYBG2Q8N1P7 616 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 STKLD1Q8NE28 680 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 PDZD8Q8NEN9 1154 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 BPIFB1Q8TDL5 484 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 MSANTD3Q96H12 275 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 NELL2Q99435 816 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 B3GNT5Q9BYG0 378 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 TBC1D17Q9HA65 648 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 IL21Q9HBE4 155 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 TRPC7Q9HCX4 862 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 RWDD2AQ9UIY3 292 aa14.67□□□□□ -0.06
VPS33B-206ENST00000557358 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.67□□□□□ -0.06
VPS33B-206ENST00000557358 CHADO15335 359 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 P4HA2O15460 535 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 AP1G2O75843 785 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 MBD3O95983 291 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 ABL1P00519 1130 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 PDGFBP01127 241 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-206ENST00000557358 CKMP06732 381 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 USP17L7P0C7H9 530 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 FAM200BP0CF97 657 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 AOC1P19801 751 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 FCARP24071 287 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 YWHAQP27348 245 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 PTPN5P54829 565 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 MCCD1P59942 119 aaPredicted RBP14.66□□□□□ -0.06
VPS33B-206ENST00000557358 INCA1Q0VD86 236 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 VITQ6UXI7 678 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 ZNF852Q6ZMS4 543 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 FAM35AQ86V20 835 aa14.66□□□□□ -0.06
VPS33B-206ENST00000557358 FAM114A1Q8IWE2 563 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms