RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 Q6ZWC4 215 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 CHSY1Q86X52 802 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 ZNF280BQ86YH2 543 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 CYP2W1Q8TAV3 490 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 DIS3LQ8TF46 1054 aaKnown RBP5.31□□□□□ -1.56
VRK1-207ENST00000557352 XAGE5Q8WWM1 108 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 MESP1Q9BRJ9 268 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 BHMT2Q9H2M3 363 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 CXorf36Q9H7Y0 433 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 CNNM1Q9NRU3 951 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 STAP2Q9UGK3 403 aa5.31□□□□□ -1.56
VRK1-207ENST00000557352 AP1G1O43747 822 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 TJP3O95049 919 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 CYP2C9P11712 490 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 PDE6CP51160 858 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 ZIK1Q3SY52 487 aaPredicted RBP5.3□□□□□ -1.56
VRK1-207ENST00000557352 TRIM72Q6ZMU5 477 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 BHLHA9Q7RTU4 235 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 ZNF366Q8N895 744 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 PNLDC1Q8NA58 520 aaKnown RBP5.3□□□□□ -1.56
VRK1-207ENST00000557352 SOCS4Q8WXH5 440 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 P2RX7Q99572 595 aaKnown RBP5.3□□□□□ -1.56
VRK1-207ENST00000557352 RHOBTB2Q9BYZ6 727 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 PIH1D1Q9NWS0 290 aaKnown RBP5.3□□□□□ -1.56
VRK1-207ENST00000557352 CCNL1Q9UK58 526 aaPredicted RBP5.3□□□□□ -1.56
VRK1-207ENST00000557352 GABRQQ9UN88 632 aa5.3□□□□□ -1.56
VRK1-207ENST00000557352 NOP58Q9Y2X3 529 aaKnown RBP5.3□□□□□ -1.56
VRK1-207ENST00000557352 MYO1CO00159 1063 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 CT47B1P0C2W7 299 aaPredicted RBP5.29□□□□□ -1.56
VRK1-207ENST00000557352 NCLP19338 710 aaKnown RBP5.29□□□□□ -1.56
VRK1-207ENST00000557352 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
VRK1-207ENST00000557352 SFPQP23246 707 aaKnown RBP eCLIP5.29□□□□□ -1.56
VRK1-207ENST00000557352 ADORA2AP29274 412 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 CTGFP29279 349 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 TPTEP56180 551 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 WNT3P56703 355 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 SATB1Q01826 763 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 TBC1D25Q3MII6 688 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 DEPDC1Q5TB30 811 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 CATSPERGQ6ZRH7 1159 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 DENND1CQ8IV53 801 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 SLC15A3Q8IY34 581 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 C9orf106Q8NAJ2 232 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 ABHD11Q8NFV4 315 aa5.29□□□□□ -1.56
VRK1-207ENST00000557352 LENG8Q96PV6 779 aaPredicted RBP5.29□□□□□ -1.56
VRK1-207ENST00000557352 THAP7Q9BT49 309 aaPredicted RBP5.29□□□□□ -1.56
VRK1-207ENST00000557352 PNMA8BQ9ULN7 279 aaPredicted RBP5.29□□□□□ -1.56
VRK1-207ENST00000557352 H3BML4 177 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 ALDH1L1O75891 902 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 PDE8BO95263 885 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
VRK1-207ENST00000557352 HTR1BP28222 390 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 PTGER1P34995 402 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 DGKEP52429 567 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 ARFIP2P53365 341 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 GPSM2P81274 684 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 SLC9A4Q6AI14 798 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 FCRL6Q6DN72 434 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 SLC2A7Q6PXP3 512 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 KIRREL2Q6UWL6 708 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 GAS2L3Q86XJ1 694 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 GALNT16Q8N428 558 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 SLC15A4Q8N697 577 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 DNAJC5GQ8N7S2 189 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 C8orf58Q8NAV2 365 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 OSCP1Q8WVF1 389 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 DAZAP1Q96EP5 407 aaKnown RBP5.28□□□□□ -1.56
VRK1-207ENST00000557352 RITA1Q96K30 269 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 C5orf34Q96MH7 638 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 NT5C1BQ96P26 610 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 ASB2Q96Q27 587 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 GABBR1Q9UBS5 961 aa5.28□□□□□ -1.56
VRK1-207ENST00000557352 A0A087WWL8 130 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 PROB1E7EW31 1015 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 H7C1Q1 480 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 MOSPD3O75425 235 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 UBXN7O94888 489 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 DLDP09622 509 aaKnown RBP5.27□□□□□ -1.57
VRK1-207ENST00000557352 NPR1P16066 1061 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 KCNA3P22001 575 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 KRT17Q04695 432 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 MCL1Q07820 350 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 GTF2H3Q13889 308 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 TTF1Q15361 905 aaPredicted RBP5.27□□□□□ -1.57
VRK1-207ENST00000557352 LY6KQ17RY6 165 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 MGAT5BQ3V5L5 792 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 MTHFD1LQ6UB35 978 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 ABRAQ8N0Z2 381 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 TERB1Q8NA31 727 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 DENND1AQ8TEH3 1009 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 KBTBD7Q8WVZ9 684 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 ZNF48Q96MX3 618 aaPredicted RBP5.27□□□□□ -1.57
VRK1-207ENST00000557352 TRIM54Q9BYV2 358 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 PRSS22Q9GZN4 317 aa5.27□□□□□ -1.57
VRK1-207ENST00000557352 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
VRK1-207ENST00000557352 ZNF521Q96K83 1311 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 SMIM35A0A1B0GVV1 85 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 EXOC3O60645 756 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 VNN1O95497 513 aa5.26□□□□□ -1.57
VRK1-207ENST00000557352 TOP3BO95985 862 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms