RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 EPS15L1Q9UBC2 864 aa14.44□□□□□ -0.1
SHMT2-228ENST00000557302 LIMD1Q9UGP4 676 aa14.44□□□□□ -0.1
SHMT2-228ENST00000557302 DOCK6Q96HP0 2047 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 SLC38A8A6NNN8 435 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 F8VP50 259 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 LAMP2P13473 410 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 CCR2P41597 374 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 RAD23BP54727 409 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 NCAPHQ15003 741 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 NFKBIBQ15653 356 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 ZSCAN23Q3MJ62 389 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 MIIPQ5JXC2 388 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 TRIM65Q6PJ69 517 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 PAQR9Q6ZVX9 377 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 RRAGAQ7L523 313 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 ARHGEF19Q8IW93 802 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 FUKQ8N0W3 1084 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 UBR7Q8N806 425 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 SLC4A11Q8NBS3 891 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 STKLD1Q8NE28 680 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 TMEM176AQ96HP8 235 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 SPATA17Q96L03 361 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 C8orf48Q96LL4 319 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 CEP295NLQ96MC4 621 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 HEXIM2Q96MH2 286 aaKnown RBP14.43□□□□□ -0.1
SHMT2-228ENST00000557302 GCNAQ96QF7 691 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 HNRNPABQ99729 332 aaKnown RBP14.43□□□□□ -0.1
SHMT2-228ENST00000557302 FUCA2Q9BTY2 467 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 KRT82Q9NSB4 513 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 GDE1Q9NZC3 331 aa14.43□□□□□ -0.1
SHMT2-228ENST00000557302 MAGED2Q9UNF1 606 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-228ENST00000557302 A0A1W2PRU2 124 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 SMTNL1A8MU46 457 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 AP1G2O75843 785 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 NOL4O94818 638 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 HMGA1P17096 107 aaKnown RBP14.42□□□□□ -0.1
SHMT2-228ENST00000557302 SLC9A1P19634 815 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
SHMT2-228ENST00000557302 GABRR2P28476 465 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 ADORA2BP29275 332 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 CDC25CP30307 473 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 ZNF165P49910 485 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 CACNA2D1P54289 1103 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 MTMR3Q13615 1198 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 KRT31Q15323 416 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 PHLDB3Q6NSJ2 640 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 DENND5BQ6ZUT9 1274 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 SHKBP1Q8TBC3 707 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 KAT5Q92993 513 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 MCRS1Q96EZ8 462 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 FAM81BQ96LP2 452 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 ATXN3LQ9H3M9 355 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 IL21Q9HBE4 155 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 UBE2TQ9NPD8 197 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-228ENST00000557302 DMAP1Q9NPF5 467 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-228ENST00000557302 UXTQ9UBK9 157 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-228ENST00000557302 PCDHB4Q9Y5E5 795 aa14.42□□□□□ -0.1
SHMT2-228ENST00000557302 NOTCH4Q99466 2003 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 MOSPD3O75425 235 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 FAM200BP0CF97 657 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 ZNF18P17022 549 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 GJA1P17302 382 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 ACO1P21399 889 aaKnown RBP14.41□□□□□ -0.1
SHMT2-228ENST00000557302 PON1P27169 355 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 TEAD2Q15562 447 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 ARHGAP15Q53QZ3 475 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 TMEM270Q6UE05 265 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 GAREM2Q75VX8 874 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 ENOSF1Q7L5Y1 443 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 TRMT2BQ96GJ1 504 aaKnown RBP14.41□□□□□ -0.1
SHMT2-228ENST00000557302 MYRFLQ96LU7 910 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 KREMEN1Q96MU8 473 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 VPS16Q9H269 839 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 SLITRK6Q9H5Y7 841 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 TMEM30AQ9NV96 361 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 EHD2Q9NZN4 543 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 APEX2Q9UBZ4 518 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 MUTYHQ9UIF7 546 aa14.41□□□□□ -0.1
SHMT2-228ENST00000557302 BECN2A8MW95 431 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 NRG2O14511 850 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-228ENST00000557302 ASGR2P07307 311 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 CD19P15391 556 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 MFAP3P55082 362 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 SGO2Q562F6 1265 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 FKBP15Q5T1M5 1219 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 PPP1R26Q5T8A7 1209 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-228ENST00000557302 MTSS1LQ765P7 747 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 DHX40Q8IX18 779 aaKnown RBP14.4□□□□□ -0.1
SHMT2-228ENST00000557302 NXPE3Q969Y0 559 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 JAKMIP2Q96AA8 810 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 KCNK16Q96T55 309 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 SMOQ99835 787 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 GPR88Q9GZN0 384 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 KCNK12Q9HB15 430 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 LIMA1Q9UHB6 759 aaKnown RBP14.4□□□□□ -0.1
SHMT2-228ENST00000557302 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 DOCK8Q8NF50 2099 aa14.4□□□□□ -0.1
SHMT2-228ENST00000557302 PTPRDP23468 1912 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms