RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SLC29A2Q14542 456 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ZSWIM7Q19AV6 140 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PVALEFA0A1B0GWK0 134 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 DFFAO00273 331 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GSTM1P09488 218 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 POLR2EP19388 210 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PDIA3P30101 505 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GRK4P32298 578 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GEMIN4P57678 1058 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 XRCC4Q13426 336 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PTRHD1Q6GMV3 140 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 DENND3A2RUS2 1198 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 H0YJX3 145 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 BNIP3LO60238 219 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ANXA9O76027 345 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 MTTPP55157 894 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 EIF5AP63241 154 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 MAGEB18Q96M61 343 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 STK33Q9BYT3 514 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF304Q9HCX3 659 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PRDM8Q9NQV8 689 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ABI2Q9NYB9 513 aaPredicted RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 AFF4Q9UHB7 1163 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 STX16-NPEPL1H3BU86 382 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 STX16O14662 325 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GFPT1Q06210 699 aaPredicted RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ARHGEF19Q8IW93 802 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 WDR48Q8TAF3 677 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 BSNDQ8WZ55 320 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 FAM20AQ96MK3 541 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 A0A088AWK7 358 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF10P21506 573 aaPredicted RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 FAM102AQ5T9C2 384 aaPredicted RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 SMIM5Q71RC9 77 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 RP9Q8TA86 221 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ASB2Q96Q27 587 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 CHD4Q14839 1912 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 C2orf81A6NN90 581 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 IGF2BP3O00425 579 aaKnown RBP eCLIP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ALDH1A3P47895 512 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 TUBA1BP68363 451 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 MFSD4BQ5TF39 518 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 MRNIPQ6NTE8 343 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 TUBA1AQ71U36 451 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GPD1LQ8N335 351 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PIGOQ8TEQ8 1089 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PPP2R3BQ9Y5P8 575 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 B2RBV5 119 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 FAM200BP0CF97 657 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 IFNAR1P17181 557 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 PLIN5Q00G26 463 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 LRRC6Q86X45 466 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 ATG16L2Q8NAA4 619 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 EMILIN2Q9BXX0 1053 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 RHOBTB2Q9BYZ6 727 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 S100A12P80511 92 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 OASLQ15646 514 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GANQ9H2C0 597 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 MTIF3Q9H2K0 278 aaKnown RBP9.14□□□□□ -0.95
SYNE3-205ENST00000557275 GPR108Q9NPR9 543 aa9.14□□□□□ -0.95
SYNE3-205ENST00000557275 RAB15P59190 212 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 SEL1L3Q68CR1 1132 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ZBTB49Q6ZSB9 765 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 TBCKQ8TEA7 893 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 FAM172AQ8WUF8 416 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CCDC28BQ9BUN5 200 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 C1QTNF1Q9BXJ1 281 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 KLHL11Q9NVR0 708 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PLEKHG1Q9ULL1 1385 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 MYOM2P54296 1465 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ADGRA2Q96PE1 1338 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ADARP55265 1226 aaKnown RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 POLR1BQ9H9Y6 1135 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CDK13Q14004 1512 aaKnown RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 C1orf232A0A0U1RR37 186 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 LRRC14BA6NHZ5 514 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 GAS2O43903 313 aaKnown RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 AKR1D1P51857 326 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 DCAF4L1Q3SXM0 396 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ZBTB33Q86T24 672 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 YAF2Q8IY57 180 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 DBNDD2Q9BQY9 259 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 CHID1Q9BWS9 393 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 COPS7BQ9H9Q2 264 aaPredicted RBP9.13□□□□□ -0.95
SYNE3-205ENST00000557275 DCKP27707 260 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 KIZQ2M2Z5 673 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 BTBD8Q5XKL5 378 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 B3GNT6Q6ZMB0 384 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 LINC00301Q8NCQ3 95 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 ZNF671Q8TAW3 534 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 BLOC1S5Q8TDH9 187 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 E2F7Q96AV8 911 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 NLNQ9BYT8 704 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 MIEF1Q9NQG6 463 aa9.13□□□□□ -0.95
SYNE3-205ENST00000557275 PYCARDQ9ULZ3 195 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms