RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LARP4BQ92615 738 aaKnown RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 SLC5A5Q92911 643 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 P2RX5Q93086 422 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 CCDC51Q96ER9 411 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 SEC16BQ96JE7 1060 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 MED15Q96RN5 788 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 HSD17B14Q9BPX1 270 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 WDR11Q9BZH6 1224 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 TANGO6Q9C0B7 1094 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 SLC38A10Q9HBR0 1119 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 SLC39A2Q9NP94 309 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 ADARB2Q9NS39 739 aaKnown RBP4.91□□□□□ -1.62
SRP54-212ENST00000556992 BLOC1S4Q9NUP1 217 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 TMOD4Q9NZQ9 345 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 CCPG1Q9ULG6 757 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.91□□□□□ -1.625e-7■■■□□ 15.5
SRP54-212ENST00000556992 NPFFR2Q9Y5X5 522 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 ZHX2Q9Y6X8 837 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 LTBP1Q14766 1721 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 SYNRGQ9UMZ2 1314 aa4.91□□□□□ -1.62
SRP54-212ENST00000556992 IGLV3-22A0A075B6J6 115 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 MYMKA6NI61 221 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 KCNJ18B7U540 433 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 AKR1B15C9JRZ8 316 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 KIF2AO00139 706 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 VWA5AO00534 786 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ATP2A1O14983 1001 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 MAFGO15525 162 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ZSCAN12O43309 604 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 STX10O60499 249 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 MAFKO60675 156 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 GNA14O95837 355 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 SSBP05455 408 aaKnown RBP eCLIP4.9□□□□□ -1.63
SRP54-212ENST00000556992 KRT18P05783 430 aaKnown RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 IDEP14735 1019 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 COMTP21964 271 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 EPS15P42566 896 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 PPP2R2AP63151 447 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 SETQ01105 290 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 LRRC63Q05C16 580 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 LRMPQ12912 555 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 STK4Q13043 487 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 KCNJ12Q14500 433 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 EPHA7Q15375 998 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 TKFCQ3LXA3 575 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 LSM12Q3MHD2 195 aaKnown RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 HERC4Q5GLZ8 1057 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 ANKRD40Q6AI12 368 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 NCAPH2Q6IBW4 605 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 CENPPQ6IPU0 288 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ARMCX5Q6P1M9 558 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 Q6ZSN1 163 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 OTOP1Q7RTM1 612 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 CATSPER3Q86XQ3 398 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 MYOCDQ8IZQ8 938 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 CPXCR1Q8N123 301 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 CSGALNACT2Q8N6G5 542 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 SYT2Q8N9I0 419 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 NEU4Q8WWR8 484 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 TBC1D5Q92609 795 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ZKSCAN4Q969J2 545 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 LENG9Q96B70 501 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 IQCDQ96DY2 449 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 C12orf42Q96LP6 360 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 OR14A2Q96R54 314 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 PANX2Q96RD6 677 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 P2RX7Q99572 595 aaKnown RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 TSG101Q99816 390 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 MXRA8Q9BRK3 442 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ZNF577Q9BSK1 485 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 IER2Q9BTL4 223 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 NUP58Q9BVL2 599 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 NAA15Q9BXJ9 866 aaKnown RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 GLIS2Q9BZE0 524 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 TRIM8Q9BZR9 551 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 KATNBL1Q9H079 304 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 TMX1Q9H3N1 280 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 RPAP3Q9H6T3 665 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 TUFT1Q9NNX1 390 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 TBC1D22BQ9NU19 505 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 PANK4Q9NVE7 773 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 FBXO28Q9NVF7 368 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 HSPBP1Q9NZL4 362 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 KCND2Q9NZV8 630 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ADD3Q9UEY8 706 aaKnown RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 PYCARDQ9ULZ3 195 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ADAMTS5Q9UNA0 930 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 INPP5FQ9Y2H2 1132 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 GDAQ9Y2T3 454 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 PAXBP1Q9Y5B6 917 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 ASTN2O75129 1339 aaPredicted RBP4.9□□□□□ -1.63
SRP54-212ENST00000556992 ZNF541Q9H0D2 1346 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 TAF1P21675 1872 aa4.9□□□□□ -1.63
SRP54-212ENST00000556992 TNRC18O15417 2968 aaPredicted RBP4.89□□□□□ -1.63
SRP54-212ENST00000556992 MAST2Q6P0Q8 1798 aa4.89□□□□□ -1.63
SRP54-212ENST00000556992 ESYT3A0FGR9 886 aa4.89□□□□□ -1.63
SRP54-212ENST00000556992 E9PMD0 336 aa4.89□□□□□ -1.63
SRP54-212ENST00000556992 H0Y858 1186 aa4.89□□□□□ -1.63
SRP54-212ENST00000556992 IPO5O00410 1097 aaKnown RBP4.89□□□□□ -1.63
SRP54-212ENST00000556992 CXCL11O14625 94 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms