RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 ZNF696Q9H7X3 374 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 CLIC5Q9NZA1 410 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 RAB26Q9ULW5 256 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 EXOC7Q9UPT5 735 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 TELO2Q9Y4R8 837 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 RBBP6Q7Z6E9 1792 aaKnown RBP13.36□□□□□ -0.27
LRP1-212ENST00000556830 WDR91A4D1P6 747 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 TTLL13PA6NNM8 815 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 MEIS2O14770 477 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 TNFAIP8O95379 198 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 SMIM18P0DKX4 95 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 CD97P48960 835 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 GPX6P59796 221 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 GABPAQ06546 454 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 TBL3Q12788 808 aaKnown RBP13.36□□□□□ -0.27
LRP1-212ENST00000556830 GPS1Q13098 491 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 CBLBQ13191 982 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
LRP1-212ENST00000556830 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 KRT39Q6A163 491 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
LRP1-212ENST00000556830 SMYD1Q8NB12 490 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 XXYLT1Q8NBI6 393 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 CYTH2Q99418 400 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 RBM38Q9H0Z9 239 aaKnown RBP13.36□□□□□ -0.27
LRP1-212ENST00000556830 FAM96AQ9H5X1 160 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 MKS1Q9NXB0 559 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 SLC17A7Q9P2U7 560 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 CHORDC1Q9UHD1 332 aaPredicted RBP13.36□□□□□ -0.27
LRP1-212ENST00000556830 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
LRP1-212ENST00000556830 C15orf38-AP3S2A0A0A6YYH1 394 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 MSH4O15457 936 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRP1-212ENST00000556830 KLHL2O95198 593 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 HNRNPCP07910 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRP1-212ENST00000556830 CDK4P11802 303 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 ACAT1P24752 427 aaKnown RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 HSPA13P48723 471 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 VCPP55072 806 aaKnown RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 BTKQ06187 659 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 CBX3Q13185 183 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 FASTKD3Q14CZ7 662 aaKnown RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 AOC3Q16853 763 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 KLHDC10Q6PID8 442 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 TRIM72Q6ZMU5 477 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 RBM44Q6ZP01 1051 aaKnown RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 TTC7BQ86TV6 843 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 PPIL6Q8IXY8 311 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 PPM1KQ8N3J5 372 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 TRPC4APQ8TEL6 797 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 GAB3Q8WWW8 586 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 PRR11Q96HE9 360 aaPredicted RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 NT5C1BQ96P26 610 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 RHBDL2Q9NX52 303 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 C6orf203Q9P0P8 240 aaPredicted RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 PPARGC1AQ9UBK2 798 aaKnown RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
LRP1-212ENST00000556830 SNCAIPQ9Y6H5 919 aa13.35□□□□□ -0.27
LRP1-212ENST00000556830 CLUHO75153 1309 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 A0A088AWK7 358 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 DENND3A2RUS2 1198 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 SFI1A8K8P3 1242 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
LRP1-212ENST00000556830 BMP3P12645 472 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 GLRA2P23416 452 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 GCLMP48507 274 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 OGFRL1Q5TC84 451 aaPredicted RBP13.34□□□□□ -0.27
LRP1-212ENST00000556830 USP37Q86T82 979 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 PRPF39Q86UA1 669 aaKnown RBP13.34□□□□□ -0.27
LRP1-212ENST00000556830 TREML1Q86YW5 311 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 DCAF4Q8WV16 495 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 HEMGNQ9BXL5 484 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 TMEM117Q9H0C3 514 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 RAB20Q9NX57 234 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 ITGA11Q9UKX5 1188 aa13.34□□□□□ -0.27
LRP1-212ENST00000556830 SUGT1Q9Y2Z0 365 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms