RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 VEPH1Q14D04 833 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 TANGO2Q6ICL3 276 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 SPATA2LQ8IUW3 424 aaPredicted RBP23.96■■□□□ 1.43
PABPN1-206ENST00000556809 MYCBPAPQ8TBZ2 947 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 FAM200AQ8TCP9 573 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 GPR152Q8TDT2 470 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 KXD1Q9BQD3 176 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 PLA2G2FQ9BZM2 168 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 CYP3A43Q9HB55 503 aa23.96■■□□□ 1.43
PABPN1-206ENST00000556809 A8MXQ7 604 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 FGF19O95750 216 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 MAGEA11P43364 429 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 MAPRE1Q15691 268 aaKnown RBP23.95■■□□□ 1.42
PABPN1-206ENST00000556809 DDR2Q16832 855 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 VWA3BQ502W6 1294 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 C4orf50Q6ZRC1 276 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 DHX40Q8IX18 779 aaKnown RBP23.95■■□□□ 1.42
PABPN1-206ENST00000556809 LMO3Q8TAP4 145 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 TATDN2Q93075 761 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 MYLPFQ96A32 169 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 ELSPBP1Q96BH3 223 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 PCED1BQ96HM7 432 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 GPR88Q9GZN0 384 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 DPEP3Q9H4B8 488 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 TRPV4Q9HBA0 871 aa23.95■■□□□ 1.42
PABPN1-206ENST00000556809 NUP210Q8TEM1 1887 aaPredicted RBP23.94■■□□□ 1.42
PABPN1-206ENST00000556809 SMTNL1A8MU46 457 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 CFHP08603 1231 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 GABRR2P28476 465 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 RPL10AP62906 217 aaKnown RBP23.94■■□□□ 1.42
PABPN1-206ENST00000556809 GPC5P78333 572 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 LRMPQ12912 555 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 MIIPQ5JXC2 388 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 STXBP5Q5T5C0 1151 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 SDHAF4Q5VUM1 108 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 TMEM150AQ86TG1 271 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 EHBP1Q8NDI1 1231 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 SMARCD2Q92925 531 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 NDST4Q9H3R1 872 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 GCNT4Q9P109 453 aa23.94■■□□□ 1.42
PABPN1-206ENST00000556809 KRBA1A5PL33 1030 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 ZNF18P17022 549 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 NPR3P17342 541 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 PTPN1P18031 435 aaKnown RBP23.93■■□□□ 1.42
PABPN1-206ENST00000556809 INCA1Q0VD86 236 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 VSTM1Q6UX27 236 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 ZSCAN18Q8TBC5 510 aaPredicted RBP23.93■■□□□ 1.42
PABPN1-206ENST00000556809 NT5C1BQ96P26 610 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 INTS2Q9H0H0 1204 aaKnown RBP23.93■■□□□ 1.42
PABPN1-206ENST00000556809 HSD3B7Q9H2F3 369 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 ATXN3LQ9H3M9 355 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 ZFP14Q9HCL3 533 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 TAB2Q9NYJ8 693 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 ZDBF2Q9HCK1 2354 aa23.93■■□□□ 1.42
PABPN1-206ENST00000556809 GTPBP10A4D1E9 387 aaKnown RBP23.92■■□□□ 1.42
PABPN1-206ENST00000556809 NOL4O94818 638 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 CAVIN2O95810 425 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 F11P03951 625 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 CSH1P0DML2 217 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 CSH2P0DML3 217 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 CUL2Q13617 745 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 KRT31Q15323 416 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 MDH1BQ5I0G3 518 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 GBP6Q6ZN66 633 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 UNC93AQ86WB7 457 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 SUGP1Q8IWZ8 645 aaKnown RBP23.92■■□□□ 1.42
PABPN1-206ENST00000556809 STKLD1Q8NE28 680 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 ANKRD20A12PQ8NF67 263 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 MYRFLQ96LU7 910 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 ARID3AQ99856 593 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 CRACR2AQ9BSW2 395 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 FBXL21Q9UKT6 434 aa23.92■■□□□ 1.42
PABPN1-206ENST00000556809 ARIH1Q9Y4X5 557 aaPredicted RBP23.92■■□□□ 1.42
PABPN1-206ENST00000556809 NCANO14594 1321 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 BECN2A8MW95 431 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 PES1O00541 588 aaKnown RBP23.91■■□□□ 1.42
PABPN1-206ENST00000556809 CD58P19256 250 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 BDNFP23560 247 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 TBXAS1P24557 533 aaPredicted RBP23.91■■□□□ 1.42
PABPN1-206ENST00000556809 CDC25CP30307 473 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 NDST1P52848 882 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 VCPP55072 806 aaKnown RBP23.91■■□□□ 1.42
PABPN1-206ENST00000556809 IQCB1Q15051 598 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 SIX5Q8N196 739 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 TTC39CQ8N584 583 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 B3GALNT2Q8NCR0 500 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 TRMT2BQ96GJ1 504 aaKnown RBP23.91■■□□□ 1.42
PABPN1-206ENST00000556809 FAM124BQ9H5Z6 455 aaPredicted RBP23.91■■□□□ 1.42
PABPN1-206ENST00000556809 CBX8Q9HC52 389 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 HMGXB4Q9UGU5 601 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 LIMA1Q9UHB6 759 aaKnown RBP23.91■■□□□ 1.42
PABPN1-206ENST00000556809 HCN4Q9Y3Q4 1203 aa23.91■■□□□ 1.42
PABPN1-206ENST00000556809 SLC38A8A6NNN8 435 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 TPM2P07951 284 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 CDK11BP21127 795 aaKnown RBP23.9■■□□□ 1.42
PABPN1-206ENST00000556809 WEE1P30291 646 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 AVPR2P30518 371 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 VIPR2P41587 438 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 CYP4F8P98187 520 aa23.9■■□□□ 1.42
PABPN1-206ENST00000556809 CYP27A1Q02318 531 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms