RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FSHRP23945 695 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 RPL10AP62906 217 aaKnown RBP18.57■□□□□ 0.56
SHMT2-225ENST00000556798 UBXN1Q04323 297 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 MTMR3Q13615 1198 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 SLC5A9Q2M3M2 681 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 VSTM1Q6UX27 236 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 DNAJB7Q7Z6W7 309 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-225ENST00000556798 RBBP8NLQ8NC74 664 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-225ENST00000556798 ADAMTS19Q8TE59 1207 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 ING5Q8WYH8 240 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 PSMG2Q969U7 264 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 CYFIP2Q96F07 1278 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 SMARCD1Q96GM5 515 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 ZNF334Q9HCZ1 680 aaPredicted RBP18.57■□□□□ 0.56
SHMT2-225ENST00000556798 ASAH2Q9NR71 780 aa18.57■□□□□ 0.56
SHMT2-225ENST00000556798 LRRC10BA6NIK2 292 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 GOLGA6L19H0YKK7 550 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-225ENST00000556798 AP1G2O75843 785 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 MYL4P12829 197 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 KRT5P13647 590 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 CD19P15391 556 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 ANXA13P27216 316 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 CCR2P41597 374 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 TPM4P67936 248 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 ZP2Q05996 745 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 SYCP1Q15431 976 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 PTPN21Q16825 1174 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 PPP1R26Q5T8A7 1209 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-225ENST00000556798 ITIH5Q86UX2 942 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 TMC8Q8IU68 726 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 RNF214Q8ND24 703 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 ITFG1Q8TB96 612 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 TCEAL4Q96EI5 215 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 KCNK16Q96T55 309 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 HNRNPABQ99729 332 aaKnown RBP18.56■□□□□ 0.56
SHMT2-225ENST00000556798 LRRC3Q9BY71 257 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 DNAI2Q9GZS0 605 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 DNAJC12Q9UKB3 198 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 MAGED2Q9UNF1 606 aaPredicted RBP18.56■□□□□ 0.56
SHMT2-225ENST00000556798 ASB3Q9Y575 518 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 FHOD1Q9Y613 1164 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 MYO10Q9HD67 2058 aa18.56■□□□□ 0.56
SHMT2-225ENST00000556798 SLC38A8A6NNN8 435 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 C2CD4DB7Z1M9 353 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 TRIM66O15016 1216 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 BEST1O76090 585 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 GJA1P17302 382 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 MFAP3P55082 362 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 ZNF445P59923 1031 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 TAF12Q16514 161 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 KLHDC7AQ5VTJ3 777 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 PDZD4Q76G19 769 aaPredicted RBP18.55■□□□□ 0.56
SHMT2-225ENST00000556798 ENOSF1Q7L5Y1 443 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 ADHFE1Q8IWW8 467 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 JAKMIP2Q96AA8 810 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 MYADMQ96S97 322 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 SMOQ99835 787 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 FAM207AQ9NSI2 230 aaPredicted RBP18.55■□□□□ 0.56
SHMT2-225ENST00000556798 SIK3Q9Y2K2 1263 aa18.55■□□□□ 0.56
SHMT2-225ENST00000556798 MRPS23Q9Y3D9 190 aaKnown RBP18.55■□□□□ 0.56
SHMT2-225ENST00000556798 NUP210Q8TEM1 1887 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 TEX33O43247 280 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 SERPINC1P01008 464 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 FAM200BP0CF97 657 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 PNMA6AP0CW24 399 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 HMGA1P17096 107 aaKnown RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 CEBPBP17676 345 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 GBP2P32456 591 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 USP8P40818 1118 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 ZNF132P52740 706 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 EPHA5P54756 1037 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 MAP3K7CLP57077 242 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 GOLGA7BQ2TAP0 167 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 SGO2Q562F6 1265 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 PRSS36Q5K4E3 855 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 CYP4A22Q5TCH4 519 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 TDRD5Q8NAT2 981 aaKnown RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 ZMIZ2Q8NF64 920 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 C8orf48Q96LL4 319 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 FAM81BQ96LP2 452 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 PCMTD1Q96MG8 357 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 DMAP1Q9NPF5 467 aaPredicted RBP18.54■□□□□ 0.56
SHMT2-225ENST00000556798 PRKAG3Q9UGI9 489 aa18.54■□□□□ 0.56
SHMT2-225ENST00000556798 A0A1W2PRU2 124 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 EPHB6O15197 1021 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 NOL4O94818 638 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 PAEPP09466 180 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 CSH1P0DML2 217 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 CSH2P0DML3 217 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 UCHL3P15374 230 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 BRD2P25440 801 aaKnown RBP18.53■□□□□ 0.56
SHMT2-225ENST00000556798 GABRR2P28476 465 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 USP46P62068 366 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 IFRD2Q12894 506 aaPredicted RBP18.53■□□□□ 0.56
SHMT2-225ENST00000556798 ARHGAP17Q68EM7 881 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 CLEC20AQ6ZU45 233 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 SHKBP1Q8TBC3 707 aa18.53■□□□□ 0.56
SHMT2-225ENST00000556798 TFAP2BQ92481 460 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms