RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SOAT2O75908 522 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 FAM163BP0C2L3 166 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 HAPLN1P10915 354 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 GLULP15104 373 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 DDX6P26196 483 aaKnown RBP eCLIP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 RPL13P26373 211 aaKnown RBP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 ATICP31939 592 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 HOXD13P35453 343 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 CYP24A1Q07973 514 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 EHHADHQ08426 723 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 STK4Q13043 487 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 GRM2Q14416 872 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 PPP2R5DQ14738 602 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 INTS6LQ5JSJ4 861 aaKnown RBP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 GPR158Q5T848 1215 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 TPRG1Q6ZUI0 275 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 LRRTM3Q86VH5 581 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 C12orf56Q8IXR9 622 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 GRAMD1CQ8IYS0 662 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 OR5B17Q8NGF7 314 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 SHKBP1Q8TBC3 707 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 ADAM32Q8TC27 787 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 SYAP1Q96A49 352 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 ZSWIM3Q96MP5 696 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 DNAI2Q9GZS0 605 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 TASP1Q9H6P5 420 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 TRPV5Q9NQA5 729 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 MAGEC2Q9UBF1 373 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 CDH9Q9ULB4 789 aa7.84□□□□□ -1.15
SCFD1-222ENST00000556768 MAGED2Q9UNF1 606 aaPredicted RBP7.84□□□□□ -1.15
SCFD1-222ENST00000556768 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 HEPACAM2A8MVW5 462 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 GABRDO14764 452 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 CHADO15335 359 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 LAMTOR5O43504 91 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 ICMTO60725 284 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 VNN2O95498 520 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 RPN1P04843 607 aaKnown RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 PDGFRBP09619 1106 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 ACAT1P24752 427 aaKnown RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 ANXA13P27216 316 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 GRIK1P39086 918 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 VIPR2P41587 438 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 CDR1P51861 262 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 NDUFA8P51970 172 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 KPNA1P52294 538 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 AMPD2Q01433 879 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 SOWAHAQ2M3V2 549 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 CFAP221Q4G0U5 840 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 MAMSTRQ6ZN01 415 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 SCN4BQ8IWT1 228 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 OR6B3Q8NGW1 331 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 NKD2Q969F2 451 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 EXOC4Q96A65 974 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 MSANTD3Q96H12 275 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 CGRRF1Q99675 332 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 LPIN3Q9BQK8 851 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 PLA2G2FQ9BZM2 168 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 IMPG2Q9BZV3 1241 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 DNAJC25Q9H1X3 360 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 SEMA4AQ9H3S1 761 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 ZNF334Q9HCZ1 680 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 HEBP1Q9NRV9 189 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 FAM86C1Q9NVL1 165 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 SPATA6Q9NWH7 488 aaPredicted RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 NXF1Q9UBU9 619 aaKnown RBP7.83□□□□□ -1.16
SCFD1-222ENST00000556768 SIX4Q9UIU6 781 aa7.83□□□□□ -1.16
SCFD1-222ENST00000556768 IKBKBO14920 756 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 GFRA3O60609 400 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ZNF202O95125 648 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ABL1P00519 1130 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ATF6P18850 670 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CD72P21854 359 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CYP2F1P24903 491 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 PDE6CP51160 858 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 SEC13P55735 322 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 WNT7BP56706 349 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CYP27A1Q02318 531 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 DDR2Q16832 855 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 ARHGAP29Q52LW3 1261 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CEP135Q66GS9 1140 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 VSTM1Q6UX27 236 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 VITQ6UXI7 678 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 GAREM2Q75VX8 874 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 TMC8Q8IU68 726 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 SLC9A9Q8IVB4 645 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CMTM8Q8IZV2 173 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 TTC9BQ8N6N2 239 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CELF5Q8N6W0 485 aaKnown RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CCDC150Q8NCX0 1101 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 FAM3CQ92520 227 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 CEP295NLQ96MC4 621 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 SYT15Q9BQS2 421 aa7.82□□□□□ -1.16
SCFD1-222ENST00000556768 DDX23Q9BUQ8 820 aaKnown RBP7.82□□□□□ -1.16
SCFD1-222ENST00000556768 LRRC3Q9BY71 257 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms