RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PATE3B3GLJ2 98 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 K7EQS6 105 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 ALDH1A2O94788 518 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 PFKLP17858 780 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 PLCG1P19174 1290 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 ACAT1P24752 427 aaKnown RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 PCSK1P29120 753 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 ADSSP30520 456 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 LHX1P48742 406 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 DHPSP49366 369 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 TSC2P49815 1807 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 TFAMQ00059 246 aaKnown RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 LMAN2Q12907 356 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 ZNF638Q14966 1978 aaKnown RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 CACNA1EQ15878 2313 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 CRY1Q16526 586 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 UAP1L1Q3KQV9 507 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 ZNF720Q7Z2F6 126 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 SPATA2LQ8IUW3 424 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 LRRC52Q8N7C0 313 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
ACTN1-221ENST00000556571 RASSF8Q8NHQ8 419 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 PIGKQ92643 395 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 PKMYT1Q99640 499 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 SCNM1Q9BWG6 230 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 GDAP2Q9NXN4 497 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 MMP17Q9ULZ9 603 aa12.75□□□□□ -0.37
ACTN1-221ENST00000556571 C2orf78A6NCI8 922 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 MYMKA6NI61 221 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 TULP1O00294 542 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 TNFRSF10BO14763 440 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 TOP3BO95985 862 aaKnown RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 ITGB3P05106 788 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 BCKDHBP21953 392 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 DDIT3P35638 169 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 LONP1P36776 959 aaKnown RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 OPRD1P41143 372 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 MAGEA11P43364 429 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 SEC13P55735 322 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 MRPS21P82921 87 aaKnown RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 COL9A2Q14055 689 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 LPCAT2Q7L5N7 544 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 CCDC33Q8N5R6 958 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 KIAA1958Q8N8K9 716 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 MDGA1Q8NFP4 955 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 OLIG1Q8TAK6 271 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 LARP4BQ92615 738 aaKnown RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 GATA6Q92908 595 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 FAM213AQ9BRX8 229 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 NUSAP1Q9BXS6 441 aaKnown RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 SLC32A1Q9H598 525 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 ITGA11Q9UKX5 1188 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 EXOC7Q9UPT5 735 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 ASPMQ8IZT6 3477 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 ASCC3Q8N3C0 2202 aaKnown RBP12.74□□□□□ -0.37
ACTN1-221ENST00000556571 DENND4CQ5VZ89 1909 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 ANK1P16157 1881 aa12.74□□□□□ -0.37
ACTN1-221ENST00000556571 PCNX2A6NKB5 2137 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 SRRM3A6NNA2 597 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-221ENST00000556571 H3BQV1 296 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 GABRDO14764 452 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 MAP3K13O43283 966 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 BMP15O95972 392 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 LDHAP00338 332 aaKnown RBP12.73□□□□□ -0.37
ACTN1-221ENST00000556571 P2RY2P41231 377 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 DPP6P42658 865 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 RBP5P82980 135 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 BYSLQ13895 437 aaKnown RBP12.73□□□□□ -0.37
ACTN1-221ENST00000556571 HSF5Q4G112 596 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-221ENST00000556571 TRIM61Q5EBN2 209 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 SPDYCQ5MJ68 293 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 LMBRD2Q68DH5 695 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-221ENST00000556571 FAM171BQ6P995 826 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 VSTM1Q6UX27 236 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 C4orf50Q6ZRC1 276 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 TTC30AQ86WT1 665 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 SYT12Q8IV01 421 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 BRSK2Q8IWQ3 736 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 ADGRF2Q8IZF7 708 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 DEFB124Q8NES8 71 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 SPATA17Q96L03 361 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 IKZF4Q9H2S9 585 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 POLMQ9NP87 494 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-221ENST00000556571 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 SNX9Q9Y5X1 595 aa12.73□□□□□ -0.37
ACTN1-221ENST00000556571 LEFTY2O00292 366 aa12.72□□□□□ -0.37
ACTN1-221ENST00000556571 SLC9A3R1O14745 358 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-221ENST00000556571 PPP1R37O75864 691 aa12.72□□□□□ -0.37
ACTN1-221ENST00000556571 PPP3CCP48454 512 aa12.72□□□□□ -0.37
ACTN1-221ENST00000556571 WNT7BP56706 349 aa12.72□□□□□ -0.37
ACTN1-221ENST00000556571 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms