RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 RAB6CQ53S08 254 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 SCUBE3Q8IX30 993 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 RAB6CQ9H0N0 254 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 MIOSQ9NXC5 875 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 KRT14P02533 472 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 KRT17Q04695 432 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 RCOR2Q8IZ40 523 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 NIPA2Q8N8Q9 360 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 EIF1ADQ8N9N8 165 aaKnown RBP19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 FBXO25Q8TCJ0 367 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 RAET1EQ8TD07 263 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 HAUS1Q96CS2 278 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 PPP1R10Q96QC0 940 aaKnown RBP19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 FMO2Q99518 471 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 MIS12Q9H081 205 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 HESX1Q9UBX0 185 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 PADI3Q9ULW8 664 aa19.28■□□□□ 0.68
SDR39U1-220ENST00000556548 PODXLO00592 558 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 HUS1O60921 280 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 HSD17B3P37058 310 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 HSPA9P38646 679 aaKnown RBP19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 DHX9Q08211 1270 aaKnown RBP19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 ITGA7Q13683 1181 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 SV2CQ496J9 727 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 ALS2CLQ60I27 953 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 GSTCDQ8NEC7 633 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 B3GNT5Q9BYG0 378 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 ZDHHC18Q9NUE0 388 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 GRHL1Q9NZI5 618 aa19.27■□□□□ 0.68
SDR39U1-220ENST00000556548 MGEA5O60502 916 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 ATP2C2O75185 946 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 CHRM1P11229 460 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 ACAT1P24752 427 aaKnown RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 PNPLA4P41247 253 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 VPS41P49754 854 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 NKX3-2P78367 333 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 SLC25A11Q02978 314 aaKnown RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 CDO1Q16878 200 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 PKDCCQ504Y2 493 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 SMYD5Q6GMV2 418 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 TRNP1Q6NT89 227 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 ZDHHC24Q6UX98 284 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 SPOCD1Q6ZMY3 1216 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 PRUNE1Q86TP1 453 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 UNC93AQ86WB7 457 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 ADGRF2Q8IZF7 708 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 IQCKQ8N0W5 287 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 MREGQ8N565 214 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 OR2W6PQ8NHA6 318 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 UBLCP1Q8WVY7 318 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 MAIP1Q8WWC4 291 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.26■□□□□ 0.672e-7■■■■■ 32.7
SDR39U1-220ENST00000556548 RBM41Q96IZ5 413 aaKnown RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 GDAP2Q9NXN4 497 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 DDX20Q9UHI6 824 aaKnown RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 FEZ2Q9UHY8 353 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 GPR182O15218 404 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 UAP1Q16222 522 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 C15orf59Q2T9L4 293 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 OSTM1Q86WC4 334 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 GOLGA6L1Q8N7Z2 621 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 FAM124BQ9H5Z6 455 aaPredicted RBP19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 CREBZFQ9NS37 354 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 PLAAQ9Y263 795 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 ATP8A1Q9Y2Q0 1164 aa19.26■□□□□ 0.67
SDR39U1-220ENST00000556548 ARL5CA6NH57 179 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 CYB561D2O14569 222 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 GABBR2O75899 941 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 CETN2P41208 172 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 SCNN1GP51170 649 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 GSCP56915 257 aaPredicted RBP19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 DYNLT1P63172 113 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 STILQ15468 1287 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 LRRC38Q5VT99 294 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 AGMOQ6ZNB7 445 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 TMC3Q7Z5M5 1100 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 PCSK9Q8NBP7 692 aaKnown RBP19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 SLC2A14Q8TDB8 520 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 SLC35F5Q8WV83 523 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 RXFP2Q8WXD0 754 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 HSPH1Q92598 858 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 ARL8AQ96BM9 186 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 TSPYL2Q9H2G4 693 aaPredicted RBP19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 ASIC3Q9UHC3 531 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 ADAM21Q9UKJ8 722 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 CASTOR2A6NHX0 329 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 PDGFRAP16234 1089 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 MIPP30301 263 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 CLCNKBP51801 687 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 ATP11AP98196 1134 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 WSCD1Q658N2 575 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 RNF180Q86T96 592 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 CLEC4CQ8WTT0 213 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 CFAP57Q96MR6 1250 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 RUNDC3BQ96NL0 473 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 PAAF1Q9BRP4 392 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 FAM204AQ9H8W3 233 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 LCMT1Q9UIC8 334 aa19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 TIMM13Q9Y5L4 95 aaPredicted RBP19.25■□□□□ 0.67
SDR39U1-220ENST00000556548 THP07101 528 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms