RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PDGFRBP09619 1106 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 DDX6P26196 483 aaKnown RBP eCLIP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 LHX1P48742 406 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 GALK1P51570 392 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 ASIC1P78348 528 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 ARHGAP8P85298 464 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 SF3A2Q15428 464 aaKnown RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 FOXD4L6Q3SYB3 417 aaPredicted RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 CFAP221Q4G0U5 840 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 FOXD4L3Q6VB84 417 aaPredicted RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 WDR5BQ86VZ2 330 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 NELFCDQ8IXH7 590 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 SYNPOQ8N3V7 929 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 ARL14EPQ8N8R7 260 aaPredicted RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 EZH1Q92800 747 aaPredicted RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 MYLPFQ96A32 169 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 TNMDQ9H2S6 317 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 SMOC1Q9H4F8 434 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 KIF9Q9HAQ2 790 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 GCNT4Q9P109 453 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 WNT6Q9Y6F9 365 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 EPG5Q9HCE0 2579 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 TNRC6BQ9UPQ9 1833 aaKnown RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 SLC30A4O14863 429 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 CLIC2O15247 247 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 TNNC2P02585 160 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 BDNFP23560 247 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 PCSK1P29120 753 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 HOXA6P31267 233 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 GJA4P35212 333 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 USP46P62068 366 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 MYO1EQ12965 1108 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 ZNF268Q14587 947 aaPredicted RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 MTF1Q14872 753 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 ZNF77Q15935 545 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 DUOXA2Q1HG44 320 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 PPM1JQ5JR12 505 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 CC2D1AQ6P1N0 951 aaPredicted RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 ZNF507Q8TCN5 953 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 MRPL45Q9BRJ2 306 aaKnown RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 GZF1Q9H116 711 aaPredicted RBP14.22□□□□□ -0.13
TGFB3-204ENST00000556285 LINC00597Q9H2U6 94 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 AGPAT3Q9NRZ7 376 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 THADAQ6YHU6 1953 aa14.22□□□□□ -0.13
TGFB3-204ENST00000556285 ABCA7Q8IZY2 2146 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 ACACBO00763 2458 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 TRAV19A0A0A6YYK7 116 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 KIAA0391O15091 583 aaKnown RBP14.21□□□□□ -0.13
TGFB3-204ENST00000556285 AXIN1O15169 862 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 RNF40O75150 1001 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 PPP6R2O75170 966 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 CNR2P34972 360 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 MAGEA11P43364 429 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 CYP2J2P51589 502 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 ZXDBP98169 803 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 FAM160A1Q05DH4 1040 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 GRSF1Q12849 480 aaKnown RBP eCLIP14.21□□□□□ -0.13
TGFB3-204ENST00000556285 USP4Q13107 963 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 PDGFRLQ15198 375 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 CSRP2Q16527 193 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 FAM26FQ5R3K3 315 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 CEP68Q76N32 757 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 DPH6Q7L8W6 267 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 TRAPPC11Q7Z392 1133 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 WDR49Q8IV35 697 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 SPATA18Q8TC71 538 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 ZNF516Q92618 1163 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 CCDC127Q96BQ5 260 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 FUBP3Q96I24 572 aaKnown RBP eCLIP14.21□□□□□ -0.13
TGFB3-204ENST00000556285 MMS19Q96T76 1030 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 BLZF1Q9H2G9 400 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 ECT2Q9H8V3 914 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 TMEM30AQ9NV96 361 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 DUS2Q9NX74 493 aaKnown RBP14.21□□□□□ -0.13
TGFB3-204ENST00000556285 MAGEC2Q9UBF1 373 aaPredicted RBP14.21□□□□□ -0.13
TGFB3-204ENST00000556285 UXTQ9UBK9 157 aaPredicted RBP14.21□□□□□ -0.13
TGFB3-204ENST00000556285 CDH9Q9ULB4 789 aa14.21□□□□□ -0.13
TGFB3-204ENST00000556285 FRYQ5TBA9 3013 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CUTAO60888 179 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CKMP06732 381 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 DLATP10515 647 aaKnown RBP14.2□□□□□ -0.14
TGFB3-204ENST00000556285 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
TGFB3-204ENST00000556285 GRIK1P39086 918 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CACNA2D1P54289 1103 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CYP27A1Q02318 531 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CYP24A1Q07973 514 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 EHHADHQ08426 723 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 SURF1Q15526 300 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 SNRNP35Q16560 246 aaKnown RBP14.2□□□□□ -0.14
TGFB3-204ENST00000556285 EML3Q32P44 896 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 MDH1BQ5I0G3 518 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 CNNM4Q6P4Q7 775 aa14.2□□□□□ -0.14
TGFB3-204ENST00000556285 STXBP4Q6ZWJ1 553 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms