RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 MAFFQ9ULX9 164 aa10.66□□□□□ -0.7
MTHFD1-213ENST00000556284 CDY1Q9Y6F8 540 aa10.66□□□□□ -0.7
MTHFD1-213ENST00000556284 ATP8B3O60423 1300 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 O00370 1275 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 RPL17P18621 184 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 TNFAIP3P21580 790 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 BRD2P25440 801 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 DNAJB1P25685 340 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 NDUFV1P49821 464 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 CAMK1Q14012 370 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 RAB33AQ14088 237 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 PTPROQ16827 1216 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 TDRD12Q587J7 1177 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 RSPO2Q6UXX9 243 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 TRIM72Q6ZMU5 477 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ZNF571Q7Z3V5 609 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 LRRC8AQ8IWT6 810 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 CCDC170Q8IYT3 715 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 FUKQ8N0W3 1084 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ANKRD52Q8NB46 1076 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 SPPL2BQ8TCT7 592 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 SLC2A14Q8TDB8 520 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 RNF166Q96A37 237 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 CCDC42Q96M95 316 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 TMEM209Q96SK2 561 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 BAG1Q99933 345 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ZSWIM1Q9BR11 485 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 SYT11Q9BT88 431 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 B3GNT5Q9BYG0 378 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ZNF518BQ9C0D4 1074 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 LHX5Q9H2C1 402 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 PDCL3Q9H2J4 239 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ZNF576Q9H609 170 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 CERS4Q9HA82 394 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ABCB6Q9NP58 842 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 FAM49BQ9NUQ9 324 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 TMLHEQ9NVH6 421 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 ARHGAP20Q9P2F6 1191 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 HESX1Q9UBX0 185 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 PCDHGC3Q9UN70 934 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 PCDHB5Q9Y5E4 795 aa10.65□□□□□ -0.7
MTHFD1-213ENST00000556284 C2orf71A6NGG8 1288 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 TEX28O15482 410 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 ADAM12O43184 909 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 ABLIM3O94929 683 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 LSM8O95777 96 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CALCAP01258 141 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 ADH1AP07327 375 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 MMEP08473 750 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CNPP09543 421 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 OR4Q2P0C623 313 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CPB1P15086 417 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CHRNB2P17787 502 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CA8P35219 290 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 EIF4A3P38919 411 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 ARPP19P56211 112 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 SLC8A3P57103 927 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 FMO1Q01740 532 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 ROR1Q01973 937 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CYP27A1Q02318 531 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CFAP221Q4G0U5 840 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 TAF3Q5VWG9 929 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 PLPP4Q5VZY2 271 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 PPP1R2P3Q6NXS1 205 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 VSTM1Q6UX27 236 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 PAQR9Q6ZVX9 377 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 SPATA2LQ8IUW3 424 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 TMEM35BQ8NCS4 154 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 ZNF461Q8TAF7 563 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 SLC20A1Q8WUM9 679 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 AUTS2Q8WXX7 1259 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 MYLPFQ96A32 169 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 PCED1BQ96HM7 432 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 KLHL5Q96PQ7 755 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CHP1Q99653 195 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 LPIN3Q9BQK8 851 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 MED10Q9BTT4 135 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 DUSP16Q9BY84 665 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 DEF6Q9H4E7 631 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 NHEJ1Q9H9Q4 299 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 HSFX1Q9UBD0 423 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 AFF4Q9UHB7 1163 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 TSPAN16Q9UKR8 245 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 CEP83Q9Y592 693 aa10.64□□□□□ -0.71
MTHFD1-213ENST00000556284 KIAA1671Q9BY89 1806 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 WDR27A2RRH5 827 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 MTMR11A4FU01 709 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 EPOPA6NHQ4 379 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 HIDE1A8MVS5 230 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 AKR1B10O60218 316 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 MICAL2O94851 1124 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 PLEKP08567 350 aaPredicted RBP10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 FAM200BP0CF97 657 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 SETSIPP0DME0 302 aa10.63□□□□□ -0.71
MTHFD1-213ENST00000556284 GZMAP12544 262 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms