RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	STIM2	Q9P246	746 aa		10.01	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CACNG4	Q9UBN1	327 aa		10.01	□□□□□ -0.81
HNRNPC-223	ENST00000556142	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.01	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SCN1A	P35498	2009 aa		10.01	□□□□□ -0.81
HNRNPC-223	ENST00000556142	LAMA2	P24043	3122 aa	Known RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TRIP11	Q15643	1979 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	FRMPD3	Q5JV73	1810 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TCRBV7S2A1N4T	A0A589	114 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142		A8MXQ7	604 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142		C9IYK1	514 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TULP2	O00295	520 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	DNM1L	O00429	736 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CYB561D2	O14569	222 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SETSIP	P0DME0	302 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SKI	P12755	728 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TCF4	P15884	667 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	RPL9	P32969	192 aa	Known RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	RFC1	P35251	1148 aa	Predicted RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PTGIR	P43119	386 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SCNN1G	P51170	649 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CLCNKB	P51801	687 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PSMC1	P62191	440 aa	Known RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PIGH	Q14442	188 aa	Predicted RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	UPP1	Q16831	310 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	LRRC38	Q5VT99	294 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	KIAA0319	Q5VV43	1072 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PMF1	Q6P1K2	205 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ANKS1B	Q7Z6G8	1248 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TMEM110	Q86TL2	294 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	RHOT1	Q8IXI2	618 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	FAM126B	Q8IXS8	530 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	KATNAL2	Q8IYT4	538 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	C3orf58	Q8NDZ4	430 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	APPL2	Q8NEU8	664 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	STK32A	Q8WU08	396 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	KHSRP	Q92945	711 aa	Known RBP eCLIP	10	□□□□□ -0.81	2e-7	■■■□□ 17.4
HNRNPC-223	ENST00000556142	PGBD4	Q96DM1	585 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	NAP1L3	Q99457	506 aa	Predicted RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SEZ6L	Q9BYH1	1024 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	DDX47	Q9H0S4	455 aa	Known RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SLITRK6	Q9H5Y7	841 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	RSAD1	Q9HA92	442 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	UBN1	Q9NPG3	1134 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	NOD1	Q9Y239	953 aa		10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SPTBN5	Q9NRC6	3674 aa	Known RBP	10	□□□□□ -0.81
HNRNPC-223	ENST00000556142	VCAN	P13611	3396 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	EYS	Q5T1H1	3165 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142		F8VP50	259 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PODXL	O00592	558 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PDGFRB	P09619	1106 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	RARA	P10276	462 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	KRT3	P12035	628 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ATP13A4	Q4VNC1	1196 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SEL1L2	Q5TEA6	688 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	WSCD1	Q658N2	575 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CCDC70	Q6NSX1	233 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TRNP1	Q6NT89	227 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	FAM183BP	Q6ZVS7	135 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PAQR9	Q6ZVX9	377 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ADGRF2	Q8IZF7	708 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PLCD3	Q8N3E9	789 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	C12orf50	Q8NA57	414 aa	Predicted RBP	9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ANKRD52	Q8NB46	1076 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	AEN	Q8WTP8	325 aa	Known RBP	9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CASKIN2	Q8WXE0	1202 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SEC14L1	Q92503	715 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SENP8	Q96LD8	212 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	HINFP	Q9BQA5	517 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PAAF1	Q9BRP4	392 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SNX25	Q9H3E2	840 aa		9.99	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	KBTBD13	C9JR72	458 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142		E5RJQ4	531 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	GOLGA8S	H3BPF8	625 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	HUS1	O60921	280 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PHF2	O75151	1096 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	ERLIN1	O75477	346 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	HEXIM1	O94992	359 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CCDC130	P13994	396 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	COL9A1	P20849	921 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TKT	P29401	623 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	SLC25A11	Q02978	314 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PDE4C	Q08493	712 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	KLF1	Q13351	362 aa	Predicted RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TRADD	Q15628	312 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PPP2R5E	Q16537	467 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	TXNRD3NB	Q6F5E7	133 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	DCUN1D2	Q6PH85	259 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	GSPT2	Q8IYD1	628 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	EIF1AD	Q8N9N8	165 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	EXD1	Q8NHP7	514 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	MAFA	Q8NHW3	353 aa	Predicted RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	PIWIL1	Q96J94	861 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	CDX2	Q99626	313 aa	Predicted RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	HNRNPAB	Q99729	332 aa	Known RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	LBHD1	Q9BQE6	289 aa	Predicted RBP	9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	UBXN6	Q9BZV1	441 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	EPB41L5	Q9HCM4	733 aa		9.98	□□□□□ -0.81
HNRNPC-223	ENST00000556142	METTL5	Q9NRN9	209 aa	Known RBP	9.98	□□□□□ -0.81

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