RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SOX9P48436 509 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 GALK1P51570 392 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 ATXN1P54253 815 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 ASIC1P78348 528 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 CLDN10P78369 228 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 TNK2Q07912 1038 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 MTF1Q14872 753 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 ZNF77Q15935 545 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 CSRP2Q16527 193 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 WDR44Q5JSH3 913 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 GPIHBP1Q8IV16 184 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC9A9Q8IVB4 645 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 CPA6Q8N4T0 437 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 OR5B17Q8NGF7 314 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 SCFD1Q8WVM8 642 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 KBTBD7Q8WVZ9 684 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 DDX1Q92499 740 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 SYAP1Q96A49 352 aaPredicted RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 DHX58Q96C10 678 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 ZFYVE19Q96K21 471 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 ZC3H10Q96K80 434 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 CGRRF1Q99675 332 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 DUSP9Q99956 384 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 SYT15Q9BQS2 421 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 ECT2Q9H8V3 914 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 RBM12Q9NTZ6 932 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 DUS2Q9NX74 493 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 TRPM5Q9NZQ8 1165 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 EBF1Q9UH73 591 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 USP25Q9UHP3 1055 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 COL4A2P08572 1712 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 OTOL1A6NHN0 477 aaPredicted RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC9A3R1O14745 358 aaPredicted RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 IKBKBO14920 756 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 TADA3O75528 432 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 NFATC1O95644 943 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 OLFM2O95897 454 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 F13A1P00488 732 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 RPN1P04843 607 aaKnown RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SLFN14P0C7P3 912 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ZSCAN22P10073 491 aaPredicted RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 PTPN1P18031 435 aaKnown RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ANXA13P27216 316 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 GRIK1P39086 918 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 IFNAR2P48551 515 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 FNTBP49356 437 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 GPR15P49685 360 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 LIMK1P53667 647 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC7A9P82251 487 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ENPEPQ07075 957 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 CYP24A1Q07973 514 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 USP4Q13107 963 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 TRPC3Q13507 836 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 EML3Q32P44 896 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 WDR72Q3MJ13 1102 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SNX30Q5VWJ9 437 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 RESP18Q5W5W9 173 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 FSTL4Q6MZW2 842 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SYT13Q7L8C5 426 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 CACNA2D4Q7Z3S7 1137 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SCN4BQ8IWT1 228 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ADGRG2Q8IZP9 1017 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 PARD3BQ8TEW8 1205 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 GAB3Q8WWW8 586 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 OVCA2Q8WZ82 227 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 CD101Q93033 1021 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ATP2A3Q93084 1043 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 PCED1BQ96HM7 432 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 MMS19Q96T76 1030 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 P2RY13Q9BPV8 354 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SNX25Q9H3E2 840 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 EBF3Q9H4W6 596 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 CRTAC1Q9NQ79 661 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SEMA4GQ9NTN9 838 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 DMAC2Q9NW81 257 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 IL37Q9NZH6 218 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 USP18Q9UMW8 372 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 PCDHA7Q9UN72 937 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC8A2Q9UPR5 921 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 PCDHGA5Q9Y5G8 931 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 NUP210Q8TEM1 1887 aaPredicted RBP8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 TICRRQ7Z2Z1 1910 aa8.31□□□□□ -1.08
PTCSC3-201ENST00000556013 ZNF840PA6NDX5 716 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 PDXKO00764 312 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 SLC30A4O14863 429 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 CLIC2O15247 247 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 MAPK13O15264 365 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 EXOC3O60645 756 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 ATP2C2O75185 946 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 RTN3O95197 1032 aaPredicted RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 KIF20AO95235 890 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 C4BPAP04003 597 aaKnown RBP8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 CKMP06732 381 aa8.3□□□□□ -1.08
PTCSC3-201ENST00000556013 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms