RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 LPXNO60711 386 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 H2AFZP0C0S5 128 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 OR4Q2P0C623 313 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 CTSAP10619 480 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 UNGP13051 313 aaPredicted RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 DNAJB2P25686 324 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 CA8P35219 290 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 VAV2P52735 878 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ERVK-21P61565 698 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 BST2Q10589 180 aaKnown RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 CCDC142Q17RM4 750 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 PPP2R2DQ66LE6 453 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 H2AFVQ71UI9 128 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 TMC7Q7Z402 723 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 LRRTM3Q86VH5 581 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ERICH1Q86X53 443 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 PHF13Q86YI8 300 aaPredicted RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 C1orf131Q8NDD1 294 aaKnown RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 FBXO22Q8NEZ5 403 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 C2orf15Q8WU43 125 aaKnown RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 SECISBP2LQ93073 1101 aaKnown RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 TRIM11Q96F44 468 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 DUSP16Q9BY84 665 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ZBP1Q9H171 429 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ISCUQ9H1K1 167 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 SYNCQ9H7C4 482 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 SLC28A3Q9HAS3 691 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ENTPD7Q9NQZ7 604 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 TAS2R14Q9NYV8 317 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 INTUQ9ULD6 942 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 REXO2Q9Y3B8 237 aaKnown RBP11.67□□□□□ -0.54
TMEM260-208ENST00000555905 PCDHB5Q9Y5E4 795 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 CDY1Q9Y6F8 540 aa11.67□□□□□ -0.54
TMEM260-208ENST00000555905 ANKRD62A6NC57 917 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 XPO1O14980 1071 aaKnown RBP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 AP1G2O75843 785 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 CXCL14O95715 111 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 MYBL1P10243 752 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 NPR3P17342 541 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 BDNFP23560 247 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 MSNP26038 577 aaKnown RBP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 OR1D2P34982 312 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 GPD2P43304 727 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 NDUFV1P49821 464 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PDE4CQ08493 712 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 KIF5AQ12840 1032 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 GPR17Q13304 367 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PDCLQ13371 301 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 SMC1AQ14683 1233 aaKnown RBP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 CFAP221Q4G0U5 840 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PKDCCQ504Y2 493 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PAQR9Q6ZVX9 377 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ZSCAN30Q86W11 494 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 TTC30AQ86WT1 665 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 WDTC1Q8N5D0 677 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 KIAA1524Q8TCG1 905 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 SPPL3Q8TCT6 385 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 IPO4Q8TEX9 1081 aaKnown RBP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 STK32AQ8WU08 396 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 AUTS2Q8WXX7 1259 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 CTNNBL1Q8WYA6 563 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 FUBP3Q96I24 572 aaKnown RBP eCLIP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 VCPIP1Q96JH7 1222 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PPP1R13BQ96KQ4 1090 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 TCF25Q9BQ70 676 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 TSGA10Q9BZW7 698 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 MIS12Q9H081 205 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 TLR9Q9NR96 1032 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ST7Q9NRC1 585 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 TMLHEQ9NVH6 421 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ABI2Q9NYB9 513 aaPredicted RBP11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ADAM22Q9P0K1 906 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 FNIP2Q9P278 1114 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 STRIP2Q9ULQ0 834 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 PTPRDP23468 1912 aa11.66□□□□□ -0.54
TMEM260-208ENST00000555905 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 FAM170AA1A519 330 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 GOLGA6L9A6NEM1 432 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 H3BNC9 293 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 CALB1P05937 261 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 TMEM253P0C7T8 217 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 RPL17P18621 184 aaKnown RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 ABCB4P21439 1286 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MMP8P22894 467 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 GRIK1P39086 918 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MAGEA11P43364 429 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 CDR1P51861 262 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 GALCP54803 685 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 MAP3K7CLP57077 242 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 GPC5P78333 572 aa11.65□□□□□ -0.54
TMEM260-208ENST00000555905 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.54
TMEM260-208ENST00000555905 ROR1Q01973 937 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms