RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PRR20BP86481 221 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 PRR20AP86496 221 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 APBA1Q02410 837 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 TNFAIP2Q03169 654 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 GFPT1Q06210 699 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-204ENST00000555890 POU5F1BQ06416 359 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 DRAP1Q14919 205 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-204ENST00000555890 PSMD6Q15008 389 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 SURF1Q15526 300 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 IFI16Q16666 785 aaKnown RBP7.3□□□□□ -1.24
SLIRP-204ENST00000555890 DGKDQ16760 1214 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 ARHGAP44Q17R89 818 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 EPC2Q52LR7 807 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 EFCAB12Q6NXP0 572 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 SLC39A4Q6P5W5 647 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 RPAINQ86UA6 219 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 RHPN2Q8IUC4 686 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF843Q8N446 348 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 METTL13Q8N6R0 699 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 CEP112Q8N8E3 955 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 FBXL13Q8NEE6 735 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 TRIM58Q8NG06 486 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 OR6J1Q8NGC5 347 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 LMO3Q8TAP4 145 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 AFG1LQ8WV93 481 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 ITPKCQ96DU7 683 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 MRPL38Q96DV4 380 aaKnown RBP7.3□□□□□ -1.24
SLIRP-204ENST00000555890 NT5C1BQ96P26 610 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 ALS2CR12Q96Q35 445 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 FNBP1Q96RU3 617 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 TCHPQ9BT92 498 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 MSTO1Q9BUK6 570 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 KATNBL1Q9H079 304 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 TMEM117Q9H0C3 514 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 UBE2TQ9NPD8 197 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-204ENST00000555890 CDC23Q9UJX2 597 aa7.3□□□□□ -1.24
SLIRP-204ENST00000555890 A0A0B4J269 797 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 A0A0U1RQJ8 604 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ANO9A1A5B4 782 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 MACROD2A1Z1Q3 448 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 FAM187AA6NFU0 413 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 RRN3P2A6NIE6 340 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 LRRIQ3A6PVS8 624 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ZBTB42B2RXF5 422 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 F8VZ95 297 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF263O14978 683 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 CLDN3O15551 220 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 WIPF1O43516 503 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ZC3H11AO75152 810 aaKnown RBP eCLIP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 TOM1L1O75674 476 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 PRKCBP05771 671 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 MMP3P08254 477 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 DLATP10515 647 aaKnown RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 GP1BBP13224 206 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 INSRRP14616 1297 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 SMPD1P17405 629 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 TNNI1P19237 187 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 TNFAIP3P21580 790 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 KLRC1P26715 233 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 SLC19A1P41440 591 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 PHKA2P46019 1235 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 GPC3P51654 580 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 NAP1L1P55209 391 aaKnown RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 IGBP1P78318 339 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 BMS1Q14692 1282 aaKnown RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 NAB2Q15742 525 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 C4orf17Q53FE4 359 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 TCEAL5Q5H9L2 206 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 WDR44Q5JSH3 913 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 COLEC12Q5KU26 742 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 C1orf220Q5T0J3 134 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 TMEM63BQ5T3F8 832 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 EGFLAMQ63HQ2 1017 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 CDCA2Q69YH5 1023 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 GJB7Q6PEY0 223 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 NXPE4Q6UWF7 544 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ENOSF1Q7L5Y1 443 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF571Q7Z3V5 609 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 HERC6Q8IVU3 1022 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 LRRC71Q8N4P6 559 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 RNF149Q8NC42 400 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 FLCNQ8NFG4 579 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 PLEKHO2Q8TD55 490 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ATRIPQ8WXE1 791 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 SEC16BQ96JE7 1060 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 NOX5Q96PH1 765 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 SLC9A7Q96T83 725 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 TARS2Q9BW92 718 aaKnown RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 KLF16Q9BXK1 252 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 BCO2Q9BYV7 579 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 LACRTQ9GZZ8 138 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 CCDC113Q9H0I3 377 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 AP5M1Q9H0R1 490 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 RNPEPQ9H4A4 650 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ZNF395Q9H8N7 513 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 RAB20Q9NX57 234 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 RBAKQ9NYW8 714 aaPredicted RBP7.29□□□□□ -1.24
SLIRP-204ENST00000555890 ADAMTS1Q9UHI8 967 aa7.29□□□□□ -1.24
SLIRP-204ENST00000555890 CD207Q9UJ71 328 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms