RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RASSF2P50749 326 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 STAT5BP51692 787 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 DYNLT1P63172 113 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ZNF252P-AS1Q0IIN9 211 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 DNAJC3Q13217 504 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 MXD4Q14582 209 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 PDK4Q16654 411 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 MAPK6Q16659 721 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 KLHL38Q2WGJ6 581 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ZNF394Q53GI3 561 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 HP1BP3Q5SSJ5 553 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 TMEM63BQ5T3F8 832 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 CYP4A22Q5TCH4 519 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 WDR78Q5VTH9 848 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 SCARA5Q6ZMJ2 495 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 CAPN12Q6ZSI9 719 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 APOBEC3FQ8IUX4 373 aaKnown RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 THNSL1Q8IYQ7 743 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 GLIS1Q8NBF1 620 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ZNF526Q8TF50 670 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 PYROXD1Q8WU10 500 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 PRPF31Q8WWY3 499 aaKnown RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 PRCCQ92733 491 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 ACSF2Q96CM8 615 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 ANKRD36BP1Q96IX9 119 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 RMDN2Q96LZ7 410 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 LRRC37BQ96QE4 947 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 MPHOSPH6Q99547 160 aaKnown RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 C2orf40Q9H1Z8 148 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 CXorf56Q9H5V9 222 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ETNK1Q9HBU6 452 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 SSU72Q9NP77 194 aaKnown RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 ARHGEF3Q9NR81 526 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 FETUBQ9UGM5 382 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ZNF112Q9UJU3 913 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 IGKV6D-21A0A0A0MT36 114 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 TCRBV5S1A1TA0A578 114 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 SIGLEC16A6NMB1 481 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 GOLGA8MH3BSY2 632 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 SOCS7O14512 581 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 HGSO14964 777 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 CST3P01034 146 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 PRKCBP05771 671 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 KRT16P08779 473 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 WEE2P0C1S8 567 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ALADP13716 330 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 GCAP28676 217 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 RPA3P35244 121 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 TNFSF9P41273 254 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 CTCFP49711 727 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 WDR4P57081 412 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 PSMC1P62191 440 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 FASTKD3Q14CZ7 662 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 TARBP2Q15633 366 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 PKN2Q16513 984 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 IER5Q5VY09 327 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 CGB2Q6NT52 195 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 BBS12Q6ZW61 710 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ASRGL1Q7L266 308 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ECHDC2Q86YB7 292 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ANKMY2Q8IV38 441 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 PDIK1LQ8N165 341 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 C4orf33Q8N1A6 199 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 KIF2BQ8N4N8 673 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 SLC35B2Q8TB61 432 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 MRRFQ96E11 262 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 ZWILCHQ9H900 591 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 SPON1Q9HCB6 807 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 WDR35Q9P2L0 1181 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 IKBKGQ9Y6K9 419 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 MCF2LO15068 1137 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 CST8O60676 142 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 MSCO60682 206 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 EDF1O60869 148 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 RNF8O76064 485 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 FARP2O94887 1054 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 IL18RAPO95256 599 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 EDN1P05305 212 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 SRGAP2CP0DJJ0 459 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 TROVE2P10155 538 aaKnown RBP eCLIP7.34□□□□□ -1.23
TDP1-213ENST00000555880 TGFB3P10600 412 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 KRT4P19013 534 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 TCF7P36402 384 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 YARSP54577 528 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 OTUD4Q01804 1114 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 OGDHQ02218 1023 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 CNTN2Q02246 1040 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 LAMTOR4Q0VGL1 99 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 MYO1EQ12965 1108 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 TFDP1Q14186 410 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 WDR72Q3MJ13 1102 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 EFHC2Q5JST6 749 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 CDCA2Q69YH5 1023 aaPredicted RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 RHPN2Q8IUC4 686 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 PALM2Q8IXS6 379 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 AGGF1Q8N302 714 aaeCLIP7.34□□□□□ -1.23
TDP1-213ENST00000555880 RNF149Q8NC42 400 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 KCTD6Q8NC69 237 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ACTL9Q8TC94 416 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 DENND1AQ8TEH3 1009 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms