RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 MAK16Q9BXY0 300 aaKnown RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 NFKBIZQ9BYH8 718 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 SPATC1LQ9H0A9 340 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 MYLK2Q9H1R3 596 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 SYNCQ9H7C4 482 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 VRTNQ9H8Y1 702 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 RSAD1Q9HA92 442 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 KIF9Q9HAQ2 790 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 ASNSD1Q9NWL6 643 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 CYTH4Q9UIA0 394 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 FZD1Q9UP38 647 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 BRCA1P38398 1863 aaKnown RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 RNF8O76064 485 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 BAG6P46379 1132 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 GDF10P55107 478 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 DYNLT1P63172 113 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 ATP11AP98196 1134 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 RNASELQ05823 741 aaKnown RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 SLC1A5Q15758 541 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 FYB2Q5VWT5 728 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 ANKRD22Q5VYY1 191 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 RHPN2Q8IUC4 686 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 ANKMY2Q8IV38 441 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 KCTD6Q8NC69 237 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 PAFAH2Q99487 392 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 MIS12Q9H081 205 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 METTL5Q9NRN9 209 aaKnown RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 NOP53Q9NZM5 478 aaKnown RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
SHMT2-222ENST00000555774 POLIQ9UNA4 740 aa14.14□□□□□ -0.15
SHMT2-222ENST00000555774 SPAG6O75602 509 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 TRUB2O95900 331 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 STIP1P31948 543 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 ELF1P32519 619 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 EIF3EP60228 445 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 TNFAIP2Q03169 654 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 SMTNL2Q2TAL5 461 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 HP1BP3Q5SSJ5 553 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 CELF3Q5SZQ8 465 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 FNBP1LQ5T0N5 605 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 TLDC1Q6P9B6 456 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 LVRNQ6Q4G3 990 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 VSIG1Q86XK7 387 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 RFX6Q8HWS3 928 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 LRRC71Q8N4P6 559 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 AGAP11Q8TF27 550 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 MZB1Q8WU39 189 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 C10orf82Q8WW14 230 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 CPXM1Q96SM3 734 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 CDT1Q9H211 546 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 CYLDQ9NQC7 956 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 GRID1Q9ULK0 1009 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 A0A1W2PPM1 405 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 GOLGA8MH3BSY2 632 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 NOP56O00567 594 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 HNRNPCL1O60812 293 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 HMGCRP04035 888 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 ERBB2P04626 1255 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 P4HA1P13674 534 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 KRT4P19013 534 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 RASSF2P50749 326 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 LY6KQ17RY6 165 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 FAM47CQ5HY64 1035 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 TREML2Q5T2D2 321 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 CAPN12Q6ZSI9 719 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 C3orf62Q6ZUJ4 267 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 NCAPG2Q86XI2 1143 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 PALM2Q8IXS6 379 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 KIAA0319LQ8IZA0 1049 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 KIF2BQ8N4N8 673 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 TTC39CQ8N584 583 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 SLC4A11Q8NBS3 891 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 FBXO36Q8NEA4 188 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 ZNF75CPQ92670 426 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 ERP27Q96DN0 273 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 TBC1D31Q96DN5 1066 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 FRMD8Q9BZ67 464 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 VPS11Q9H270 941 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 ETNK1Q9HBU6 452 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 GGA3Q9NZ52 723 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 XPO7Q9UIA9 1087 aaKnown RBP14.13□□□□□ -0.15
SHMT2-222ENST00000555774 SIX4Q9UIU6 781 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 CHKBQ9Y259 395 aa14.13□□□□□ -0.15
SHMT2-222ENST00000555774 C2CD2LO14523 706 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 CILPO75339 1184 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 MICAL2O94851 1124 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 ENDOD1O94919 500 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 KRT19P08727 400 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 MARK3P27448 753 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 MIPP30301 263 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 MBTD1Q05BQ5 628 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 POU5F1BQ06416 359 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 TFDP2Q14188 446 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 SEPT7Q16181 437 aaKnown RBP14.12□□□□□ -0.15
SHMT2-222ENST00000555774 KYAT1Q16773 422 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 TMEM132AQ24JP5 1023 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 SLC45A4Q5BKX6 768 aa14.12□□□□□ -0.15
SHMT2-222ENST00000555774 KCNT1Q5JUK3 1230 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms