RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CCDC138Q96M89 665 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 RIPOR3Q96MK2 946 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 MPHOSPH6Q99547 160 aaKnown RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 ADAM2Q99965 735 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 KRTAP17-1Q9BYP8 105 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 GALNT9Q9HCQ5 603 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 SERHLQ9NQF3 203 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 XPNPEP3Q9NQH7 507 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 FNIP2Q9P278 1114 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 MTO1Q9Y2Z2 717 aaKnown RBP4.09□□□□□ -1.75
SRP54-209ENST00000555746 ARHGAP23Q9P227 1491 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 ABCC1P33527 1531 aa4.09□□□□□ -1.75
SRP54-209ENST00000555746 KIF14Q15058 1648 aa4.09□□□□□ -1.76
SRP54-209ENST00000555746 SPHKAPQ2M3C7 1700 aa4.09□□□□□ -1.76
SRP54-209ENST00000555746 SHANK3Q9BYB0 1731 aa4.09□□□□□ -1.76
SRP54-209ENST00000555746 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 A0A1W2PPC4 97 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 POM121BA6NF01 834 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 TMEM233B4DJY2 109 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 CDKL5O76039 1030 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 MT-ND5P03915 603 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 ANXA2P07355 339 aaKnown RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 TXNP10599 105 aaKnown RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 IL1R1P14778 569 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 LAG3P18627 525 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 TNFSF4P23510 183 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 DDX6P26196 483 aaKnown RBP eCLIP4.08□□□□□ -1.76
SRP54-209ENST00000555746 GCLCP48506 637 aaPredicted RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 VAV2P52735 878 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 LOXL3P58215 753 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 RPS7P62081 194 aaKnown RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 BTKQ06187 659 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 FOXE3Q13461 319 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 DIP2AQ14689 1571 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 IQCB1Q15051 598 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 SPDYE7PQ495Y7 208 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 NRN1LQ496H8 165 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 DGKKQ5KSL6 1271 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 ZC3H13Q5T200 1668 aaKnown RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 AHDC1Q5TGY3 1603 aaPredicted RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 DCAF12L1Q5VU92 463 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 PRRT2Q7Z6L0 340 aaPredicted RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 SPICE1Q8N0Z3 855 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 FAM109AQ8N4B1 249 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 ADGBQ8N7X0 1667 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 ATP11CQ8NB49 1132 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 CPEB3Q8NE35 698 aaKnown RBP4.08□□□□□ -1.76
SRP54-209ENST00000555746 DEPTORQ8TB45 409 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 SPSB4Q96A44 273 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 SNX22Q96L94 193 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 SLC46A1Q96NT5 459 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 OSBPL9Q96SU4 736 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 ALOXE3Q9BYJ1 711 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 CHST8Q9H2A9 424 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 GPRC5BQ9NZH0 403 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 KIAA1210Q9ULL0 1709 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 DIP2CQ9Y2E4 1556 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 NOX1Q9Y5S8 564 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 RAD54BQ9Y620 910 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 HS3ST4Q9Y661 456 aa4.08□□□□□ -1.76
SRP54-209ENST00000555746 ATRNO75882 1429 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 TMEM94Q12767 1356 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 CLCA1A8K7I4 914 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 TOR1BO14657 336 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 CCP110O43303 1012 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 VPS4BO75351 444 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 FGF18O76093 207 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 NDUFA10O95299 355 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 ADRB1P08588 477 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 LRPAP1P30533 357 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 PTGS2P35354 604 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 RGS19P49795 217 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 ZNF134P52741 427 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 MC2RQ01718 297 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 RESTQ13127 1097 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 OS9Q13438 667 aaPredicted RBP4.07□□□□□ -1.76
SRP54-209ENST00000555746 FAM209BQ5JX69 171 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 IZUMO3Q5VZ72 239 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 SLC30A10Q6XR72 485 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 MICALCLQ6ZW33 695 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 ARHGEF19Q8IW93 802 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 COLGALT2Q8IYK4 626 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 ADGRG5Q8IZF4 528 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 MPP5Q8N3R9 675 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 SDR16C5Q8N3Y7 309 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 PLEKHG4BQ96PX9 1271 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 NELL2Q99435 816 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 MS4A7Q9GZW8 240 aaPredicted RBP4.07□□□□□ -1.76
SRP54-209ENST00000555746 DHX36Q9H2U1 1008 aaKnown RBP4.07□□□□□ -1.76
SRP54-209ENST00000555746 SMOC2Q9H3U7 446 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 UNKLQ9H9P5 680 aaKnown RBP4.07□□□□□ -1.76
SRP54-209ENST00000555746 MYO1AQ9UBC5 1043 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 CAPN11Q9UMQ6 739 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 SHOC2Q9UQ13 582 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 MAP3K2Q9Y2U5 619 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 COMMD10Q9Y6G5 202 aa4.07□□□□□ -1.76
SRP54-209ENST00000555746 CLTCQ00610 1675 aaKnown RBP4.06□□□□□ -1.76
SRP54-209ENST00000555746 ITSN2Q9NZM3 1697 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms